RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ODAMA1E959 279 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 MEX3AA1L020 520 aaKnown RBP8.43□□□□□ -1.06
SMG1-208ENST00000563448 CEACAM18A8MTB9 384 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 KIR2DS4P43632 304 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 EDDM3BP56851 147 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 KIR2DS1Q14954 304 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 TMEM155Q4W5P6 130 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 OR13C8Q8NGS7 320 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 MRGPRDQ8TDS7 321 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 MRGPRFQ96AM1 343 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 UPRTQ96BW1 309 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 NCOR1P1Q9H4R4 102 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 SLC2A8Q9NY64 477 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 MGAT4AQ9UM21 535 aa8.43□□□□□ -1.06
SMG1-208ENST00000563448 DVL1O14640 695 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 NDUFB3O43676 98 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 ATP6V1G1O75348 118 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 NDUFB6O95139 128 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 IFNA6P05013 189 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 NDUFB7P17568 137 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 GPR6P46095 362 aaPredicted RBP8.42□□□□□ -1.06
SMG1-208ENST00000563448 CR1LQ2VPA4 569 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 SCGB2B2Q4G0G5 96 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
SMG1-208ENST00000563448 PLET1Q6UQ28 207 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 ZNF841Q6ZN19 808 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 IDO2Q6ZQW0 420 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 BTN2A1Q7KYR7 527 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 ARRDC1Q8N5I2 433 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 OR4A4PQ8NGN8 299 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 UBALD1Q8TB05 177 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 LURAP1Q96LR2 239 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 PRRT1Q99946 306 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 TAF9BQ9HBM6 251 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 COPZ2Q9P299 210 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 SCP2D1Q9UJQ7 156 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 NUBP2Q9Y5Y2 271 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 BAHCC1Q9P281 2608 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 TRAV6A0A075B6T7 132 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 FUOMA2VDF0 154 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 C12orf77C9JDV5 145 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 OR5H8P0DN80 308 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 PAX1P15863 534 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 SEC61A1P61619 476 aaKnown RBP8.42□□□□□ -1.06
SMG1-208ENST00000563448 TSPAN5P62079 268 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 CBX3Q13185 183 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 RBMS2Q15434 407 aaKnown RBP8.42□□□□□ -1.06
SMG1-208ENST00000563448 LRRC10Q5BKY1 277 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 C6orf183Q5T699 404 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 AADACL3Q5VUY0 350 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 DHRS11Q6UWP2 260 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 TCF23Q7RTU1 214 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 LHFPL1Q86WI0 220 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 OR1L1Q8NH94 360 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 KIRREL1Q96J84 757 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 GINS4Q9BRT9 223 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 ZNF2Q9BSG1 426 aaPredicted RBP8.42□□□□□ -1.06
SMG1-208ENST00000563448 MARVELD1Q9BSK0 173 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 CABLES2Q9BTV7 478 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 TMPRSS13Q9BYE2 586 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 KCNIP1Q9NZI2 227 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 MIOXQ9UGB7 285 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
SMG1-208ENST00000563448 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 C15orf65H3BRN8 121 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 BET1O15155 118 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 WNT2P09544 360 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 CGB3P0DN86 165 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 CGB7P0DN87 165 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 RPS2P15880 293 aaKnown RBP8.41□□□□□ -1.06
SMG1-208ENST00000563448 SSTR5P35346 364 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 GLP1RP43220 463 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 PDLIM4P50479 330 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 ATP5J2P56134 94 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 C17orf58Q2M2W7 97 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 PRR18Q8N4B5 295 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 TERB2Q8NHR7 220 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 C20orf85Q9H1P6 137 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 PATZ1Q9HBE1 687 aaKnown RBP8.41□□□□□ -1.06
SMG1-208ENST00000563448 C19orf12Q9NSK7 152 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 NUDT15Q9NV35 164 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 TRBV6-7A0A0A0MS04 114 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 OR5H14A6NHG9 310 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 F5H0A9 414 aaPredicted RBP8.41□□□□□ -1.06
SMG1-208ENST00000563448 ARPC1BO15143 372 aaKnown RBP8.41□□□□□ -1.06
SMG1-208ENST00000563448 HBZP02008 142 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 CTXN2P0C2S0 81 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 NFYAP23511 347 aaPredicted RBP8.41□□□□□ -1.06
SMG1-208ENST00000563448 FCGR2CP31995 323 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 TRAT1Q6PIZ9 186 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 TMEM17Q86X19 198 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 SPICQ8N5J4 248 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 OR6F1Q8NGZ6 308 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 CORO2AQ92828 525 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 ARL11Q969Q4 196 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 CREB3L1Q96BA8 519 aa8.41□□□□□ -1.06
SMG1-208ENST00000563448 NEIL1Q96FI4 390 aaPredicted RBP8.41□□□□□ -1.06
SMG1-208ENST00000563448 PERPQ96FX8 193 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms