RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OR11L1Q8NGX0 322 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 ANGPTL6Q8NI99 470 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 MS4A5Q9H3V2 200 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 HEXA-AS1Q9H8Q6 139 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 SAP30LQ9HAJ7 183 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 TMEM30CPA0ZSE6 113 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 C19orf84I3L1E1 186 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 ECI1P42126 302 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 TAS2R31P59538 309 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 IL13RA1P78552 427 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 TMEM128Q5BJH2 165 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 TEX261Q6UWH6 196 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 NLRC3Q7RTR2 1065 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 MUC15Q8N387 334 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 OR4A4PQ8NGN8 299 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 TOMM40LQ969M1 308 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 MOB3AQ96BX8 217 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 EGLN1Q9GZT9 426 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 KIF25Q9UIL4 384 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 U3KQ87 197 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 B8ZZF3 427 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 G3V3Q6 166 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 TK1P04183 234 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 CTXN2P0C2S0 81 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 VAMP1P23763 118 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 KCNJ3P48549 501 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 MOB1BQ7L9L4 216 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 TPRX1Q8N7U7 411 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 DEFB108BQ8NET1 73 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 OR8H1Q8NGG4 311 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 KIRREL1Q96J84 757 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 MAB21L2Q9Y586 359 aa15.09■□□□□ 0.01
COMMD4-208ENST00000563220 SPTBN1Q01082 2364 aaKnown RBP15.08■□□□□ 0.01
COMMD4-208ENST00000563220 SIX6O95475 246 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 PPYP01298 95 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 CTSDP07339 412 aaPredicted RBP15.08■□□□□ 0.01
COMMD4-208ENST00000563220 ZNF728P0DKX0 622 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 IRF2P14316 349 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 RPS2P15880 293 aaKnown RBP15.08■□□□□ 0.01
COMMD4-208ENST00000563220 GLIPR1P48060 266 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 SUPT4H1P63272 117 aaKnown RBP15.08■□□□□ 0.01
COMMD4-208ENST00000563220 ZNRF1Q8ND25 227 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 UBALD1Q8TB05 177 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 CASTOR1Q8WTX7 329 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 WDR89Q96FK6 387 aaPredicted RBP15.08■□□□□ 0.01
COMMD4-208ENST00000563220 SNX22Q96L94 193 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 CABLES2Q9BTV7 478 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 PIPOXQ9P0Z9 390 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 PCDHB10Q9UN67 800 aa15.08■□□□□ 0.01
COMMD4-208ENST00000563220 C14orf166Q9Y224 244 aaKnown RBP15.08■□□□□ 0.01
COMMD4-208ENST00000563220 TRBV6-7A0A0A0MS04 114 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 TUSC2O75896 110 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 GIPP09681 153 aaPredicted RBP15.08■□□□□ 0
COMMD4-208ENST00000563220 CD34P28906 385 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 HMGN3Q15651 99 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 LGALSLQ3ZCW2 172 aaPredicted RBP15.08■□□□□ 0
COMMD4-208ENST00000563220 KRBOX4Q5JUW0 171 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 LIN54Q6MZP7 749 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 CLEC18BQ6UXF7 455 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 PRR18Q8N4B5 295 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 ZNF680Q8NEM1 530 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 OR2T35Q8NGX2 323 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 MITD1Q8WV92 249 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 TAF9BQ9HBM6 251 aa15.08■□□□□ 0
COMMD4-208ENST00000563220 ZFYVE26Q68DK2 2539 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 SLC22A5O76082 557 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 OR2A4O95047 310 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 SFT2D2O95562 160 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 UCP3P55916 312 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 TEX36Q5VZQ5 186 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 STUMQ69YW2 141 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 IL1F10Q8WWZ1 152 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 OR2A7Q96R45 310 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 CHIAQ9BZP6 476 aa15.07■□□□□ 0
COMMD4-208ENST00000563220 A0A1B0GW55 424 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 LINC00862A6NCI5 91 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 K7N7A8 449 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 GOSR2O14653 212 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUS4LO95620 317 aaKnown RBP15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4L2P0CJ85 424 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4L3P0CJ86 424 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4L4P0CJ87 422 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4L5P0CJ88 424 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4L6P0CJ89 424 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4L7P0CJ90 424 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 SELLP14151 372 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 H2BFSP57053 126 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 RAP2BP61225 183 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 HERV-K104P61576 105 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 PAX5Q02548 391 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 SLC9A3R2Q15599 337 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4L9Q6RFH8 374 aaPredicted RBP15.06■□□□□ 0
COMMD4-208ENST00000563220 CCL17Q92583 94 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 OR1A1Q9P1Q5 309 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 DUX4Q9UBX2 424 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 ABCA4P78363 2273 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 IGKV1D-13A0A0B4J2D9 117 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 OOEPA6NGQ2 149 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 LRRC30A6NM36 301 aa15.06■□□□□ 0
COMMD4-208ENST00000563220 TMEM178BH3BS89 294 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms