RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 AQP3Q92482 292 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 CCL17Q92583 94 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 RPL3LQ92901 407 aaKnown RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 SEH1LQ96EE3 360 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 MRPL48Q96GC5 212 aaKnown RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 LINC00479Q96M42 142 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 DERL3Q96Q80 235 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 MYCBPQ99417 103 aaPredicted RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 GFI1Q99684 422 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 MGLLQ99685 303 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 SMR3AQ99954 134 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 RTL8AQ9BWD3 113 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 PAPOLGQ9BWT3 736 aaKnown RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 WDR13Q9H1Z4 485 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 Q9H521 79 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 HES4Q9HCC6 221 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ABCB9Q9NP78 766 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 UFSP2Q9NUQ7 469 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 C1orf123Q9NWV4 160 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 CTSZQ9UBR2 303 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 CACNG5Q9UF02 275 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 OR14J1Q9UGF5 321 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ZNF222Q9UK12 451 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 PPP1R3CQ9UQK1 317 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ERGIC3Q9Y282 383 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 NPTNQ9Y639 398 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ACANP16112 2415 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TRAV8-7A0A075B6U6 113 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 PPIAL4EA0A075B759 164 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 A0A0J9YWU9 116 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 A0A1B0GW55 424 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 A8MXK9 166 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 ZNF879B4DU55 563 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 CLDN25C9JDP6 229 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 PPIAL4DF5H284 164 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 J3QT63 122 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 SULT1B1O43704 296 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 IGHV2-5P01817 119 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TFF1P04155 84 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 ALDOBP05062 364 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 ERCC1P07992 297 aaPredicted RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 RPSAP08865 295 aaKnown RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 WNT2P09544 360 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 UCHL1P09936 223 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4L2P0CJ85 424 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4L3P0CJ86 424 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4L4P0CJ87 422 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4L5P0CJ88 424 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4L6P0CJ89 424 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4L7P0CJ90 424 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 PGA5P0DJD9 388 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 PPIAL4FP0DN26 164 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 IGHV4-31P0DP07 118 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 IGHV4-38-2P0DP08 117 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 CD99P14209 185 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 CELP19835 753 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 USF1P22415 310 aaPredicted RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 AZGP1P25311 298 aaKnown RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 CD80P33681 288 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TGFBR2P37173 567 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 GPR6P46095 362 aaPredicted RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 GPM6AP51674 278 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 BTG1P62324 171 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 RPS25P62851 125 aaKnown RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 GNG3P63215 75 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 SLC3A1Q07837 685 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 IL24Q13007 206 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TMEM187Q14656 261 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 MED22Q15528 200 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TMEM249Q2WGJ8 235 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 HFEQ30201 348 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 ZNF404Q494X3 552 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 Q499Y3 187 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 FAM27D1Q5T7N8 215 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 SYT6Q5T7P8 510 aaPredicted RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 LIPKQ5VXJ0 399 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 PLCXD3Q63HM9 321 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 STUMQ69YW2 141 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 HAGHLQ6PII5 290 aaPredicted RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 DUX4L9Q6RFH8 374 aaPredicted RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 LYPD2Q6UXB3 125 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 LRRTM1Q86UE6 522 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 COMMD2Q86X83 199 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 ANGPTL5Q86XS5 388 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 SERPINA12Q8IW75 414 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 FTMTQ8N4E7 242 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 Q8NFD4 153 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 OR13C3Q8NGS6 347 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 OR13C9Q8NGT0 318 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 OR8S1Q8NH09 359 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 GPR148Q8TDV2 347 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 LRRC29Q8WV35 223 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TMEM106AQ96A25 262 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 SPSB1Q96BD6 273 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 RNF170Q96K19 258 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 C18orf12Q96KH6 178 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 C1orf147Q96MC9 270 aaPredicted RBP3.7□□□□□ -1.82
SMG1-206ENST00000562668 ZNF488Q96MN9 340 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 TECTBQ96PL2 329 aa3.7□□□□□ -1.82
SMG1-206ENST00000562668 MICU1Q9BPX6 476 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms