RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PSG11Q9UQ72 335 aa14.3□□□□□ -0.12
CMTM3-204ENST00000562357 TRRAPQ9Y4A5 3859 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 TRAV39A0A0B4J263 110 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A10PA6NDY2 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A18PA6NE21 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A16PA6NEW6 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 ERICH4A6NGS2 130 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A20PA6NIJ5 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A7PA6NKC0 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A12PA8MX19 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A5PA8MXJ8 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A23PA8MXZ1 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 PIN1P1O15428 100 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 OR2F2O95006 317 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 IGHV3-7P01780 117 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A15PP0C7V4 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A13PP0C7W8 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A14PP0C7W9 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 FAM90A24PP0C7X0 464 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 UBBP0CG47 229 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 MGMTP16455 207 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 HSPA13P48723 471 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 RAB7AP51149 207 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 BLCAPP62952 87 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 RBM48Q5RL73 367 aaKnown RBP14.29□□□□□ -0.12
CMTM3-204ENST00000562357 C6orf183Q5T699 404 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 GLT8D1Q68CQ7 371 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 RAB12Q6IQ22 244 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 CCDC107Q8WV48 283 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 NRG4Q8WWG1 115 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 CFHR4Q92496 578 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 BANF2Q9H503 90 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 ZNF581Q9P0T4 197 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 WNK1Q9H4A3 2382 aa14.29□□□□□ -0.12
CMTM3-204ENST00000562357 PKD1L1Q8TDX9 2849 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 LY6LH3BQJ8 138 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 SDCBPO00560 298 aaPredicted RBP14.28□□□□□ -0.12
CMTM3-204ENST00000562357 SPINT2O43291 252 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 RGS10O43665 173 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 ORC5O43913 435 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 CA11O75493 328 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 MYF6P23409 242 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 SLC35A2P78381 396 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 TMEM30BQ3MIR4 351 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 HSD17B12Q53GQ0 312 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 ZNF497Q6ZNH5 498 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 OR8H3Q8N146 312 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 OR52M1Q8NGK5 317 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 PHYHIPQ92561 330 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 RBM14Q96PK6 669 aaKnown RBP14.28□□□□□ -0.12
CMTM3-204ENST00000562357 CCDC90BQ9GZT6 254 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 RCC2Q9P258 522 aaKnown RBP14.28□□□□□ -0.12
CMTM3-204ENST00000562357 PEX16Q9Y5Y5 336 aa14.28□□□□□ -0.12
CMTM3-204ENST00000562357 TET2Q6N021 2002 aaPredicted RBP14.27□□□□□ -0.12
CMTM3-204ENST00000562357 MT-ND4P03905 459 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 HSMCR30P0CW71 290 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 IL3RAP26951 378 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 DEFA6Q01524 100 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 EMX1Q04741 257 aaPredicted RBP14.27□□□□□ -0.13
CMTM3-204ENST00000562357 HES1Q14469 280 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 TRAT1Q6PIZ9 186 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 CEACAM19Q7Z692 300 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 FAM46BQ96A09 425 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 ANKRD60Q9BZ19 345 aa14.27□□□□□ -0.13
CMTM3-204ENST00000562357 GLAP06280 429 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 LPLP06858 475 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 FUT3P21217 361 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 TRAM1Q15629 374 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 ABCA11PQ4W5N1 156 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 UTF1Q5T230 341 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 SYT6Q5T7P8 510 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-204ENST00000562357 UNQ9370/PRO34162Q6UXP9 181 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 IZUMO2Q6UXV1 221 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 OR56B4Q8NH76 319 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 WNT10AQ9GZT5 417 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 GNG12Q9UBI6 72 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 BLOC1S6Q9UL45 172 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 LSM2Q9Y333 95 aaKnown RBP14.26□□□□□ -0.13
CMTM3-204ENST00000562357 MOB4Q9Y3A3 225 aa14.26□□□□□ -0.13
CMTM3-204ENST00000562357 C15orf65H3BRN8 121 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 CCRL2O00421 344 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 HSD17B6O14756 317 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 PDCD6O75340 191 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 MPIG6BO95866 241 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 SNRNP70P08621 437 aaKnown RBP14.25□□□□□ -0.13
CMTM3-204ENST00000562357 PSMA1P25786 263 aaKnown RBP14.25□□□□□ -0.13
CMTM3-204ENST00000562357 INSL4Q14641 139 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 NSUN5P1Q3KNT7 163 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 C9orf152Q5JTZ5 239 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 LIPKQ5VXJ0 399 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 CENPVQ7Z7K6 275 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-204ENST00000562357 NDUFA11Q86Y39 141 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 THNSL2Q86YJ6 484 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 PRR18Q8N4B5 295 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 DRAM1Q8N682 238 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 TMEM104Q8NE00 496 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 Q96M66 194 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 NEDD4LQ96PU5 975 aa14.25□□□□□ -0.13
CMTM3-204ENST00000562357 DUSP21Q9H596 190 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms