RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ROBO3Q96MS0 1386 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 SEC16AO15027 2179 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 A0A1B0GW15 77 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 UPK1AO00322 258 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 MFNGO00587 321 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 YKT6O15498 198 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 OR4Q2P0C623 313 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 IDH2P48735 452 aaKnown RBP3.34□□□□□ -1.87
SMG1-204ENST00000561940 HADHBP55084 474 aaKnown RBP3.34□□□□□ -1.87
SMG1-204ENST00000561940 LINC00303Q3SY05 128 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 N4BP2L1Q5TBK1 243 aaPredicted RBP3.34□□□□□ -1.87
SMG1-204ENST00000561940 RNF10Q8N5U6 811 aaKnown RBP3.34□□□□□ -1.87
SMG1-204ENST00000561940 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 ZNF75AQ96N20 296 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 ASB7Q9H672 318 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 CHMP5Q9NZZ3 219 aa3.34□□□□□ -1.87
SMG1-204ENST00000561940 VWA8A3KMH1 1905 aa3.34□□□□□ -1.88
SMG1-204ENST00000561940 COL1A2P08123 1366 aa3.34□□□□□ -1.88
SMG1-204ENST00000561940 MYO18BQ8IUG5 2567 aa3.34□□□□□ -1.88
SMG1-204ENST00000561940 PLXNB3Q9ULL4 1909 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 OTOFQ9HC10 1997 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 NEMFO60524 1076 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 RLN2P04090 185 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 MPV17P39210 176 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 RANBP1P43487 201 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 DNASE1L1P49184 302 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 ACOT2P49753 483 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 DSTNP60981 165 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 ATP5G2Q06055 141 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 STX4Q12846 297 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 IDNKQ5T6J7 187 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 PRR9Q5T870 116 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 KCTD16Q68DU8 428 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 CASP12Q6UXS9 341 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 DEFB128Q7Z7B8 93 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 LRRC8AQ8IWT6 810 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 CYP4Z2PQ8N1L4 340 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 CLHC1Q8NHS4 586 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 DOK4Q8TEW6 326 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 ZNF721Q8TF20 911 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 C22orf15Q8WYQ4 148 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 QKIQ96PU8 341 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMG1-204ENST00000561940 CIB1Q99828 191 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 CTRCQ99895 268 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 PLEKHA1Q9HB21 404 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 NXT1Q9UKK6 140 aaKnown RBP3.33□□□□□ -1.88
SMG1-204ENST00000561940 RFX7Q2KHR2 1363 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 COL4A1P02462 1669 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 BPTFQ12830 3046 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 KIF20BQ96Q89 1820 aa3.33□□□□□ -1.88
SMG1-204ENST00000561940 C5orf67F2Z3F1 127 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.32□□□□□ -1.88
SMG1-204ENST00000561940 K7ERQ8 282 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 ZMPSTE24O75844 475 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 UBE2KP61086 200 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 TRDNQ13061 729 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 GPR176Q14439 515 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 CEACAM16Q2WEN9 425 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 FAM231DQ6ZW35 169 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 ZNF396Q96N95 335 aaPredicted RBP3.32□□□□□ -1.88
SMG1-204ENST00000561940 RILPQ96NA2 401 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 RTBDNQ9BSG5 229 aaPredicted RBP3.32□□□□□ -1.88
SMG1-204ENST00000561940 POFUT2Q9Y2G5 429 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 DMXL1Q9Y485 3027 aa3.32□□□□□ -1.88
SMG1-204ENST00000561940 hCG_2039718K7EN88 272 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 TCAPO15273 167 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 OR2A4O95047 310 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 IGLV3-19P01714 112 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 TAC1P20366 129 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 M6PRP20645 277 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 MPIP34949 423 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 TGM4P49221 684 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 USF2Q15853 346 aaPredicted RBP3.31□□□□□ -1.88
SMG1-204ENST00000561940 ZDHHC22Q8N966 263 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 CDRT4Q8N9R6 151 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 CCDC124Q96CT7 223 aaKnown RBP3.31□□□□□ -1.88
SMG1-204ENST00000561940 OR2A7Q96R45 310 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 VAT1Q99536 393 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 IL37Q9NZH6 218 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 CYB5R1Q9UHQ9 305 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 Q9Y3F1 56 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 INSIG2Q9Y5U4 225 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 TRIOO75962 3097 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 PRR14LQ5THK1 2151 aa3.31□□□□□ -1.88
SMG1-204ENST00000561940 SIPA1L3O60292 1781 aaPredicted RBP3.3□□□□□ -1.88
SMG1-204ENST00000561940 WDR87Q6ZQQ6 2873 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 ASXL3Q9C0F0 2248 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 IZUMO1RA6ND01 250 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 RBFOX3A6NFN3 312 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 J3QKU1 62 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 IGKV1-17P01599 117 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 IGHV1-46P01743 117 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 OR5AC1P0C628 307 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 MEF2CQ06413 473 aaPredicted RBP3.3□□□□□ -1.88
SMG1-204ENST00000561940 ZNF404Q494X3 552 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 TMEM136Q6ZRR5 245 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 SSX6Q7RTT6 188 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 SGPP2Q8IWX5 399 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 ZNF555Q8NEP9 628 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms