RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CLEC2LP0C7M8 214 aa8.79□□□□□ -1
TPM1-229ENST00000561242 SMIM18P0DKX4 95 aa8.79□□□□□ -1
TPM1-229ENST00000561242 OMGP23515 440 aa8.79□□□□□ -1
TPM1-229ENST00000561242 ZBTB25P24278 435 aa8.79□□□□□ -1
TPM1-229ENST00000561242 CHATP28329 748 aa8.79□□□□□ -1
TPM1-229ENST00000561242 CBX5P45973 191 aa8.79□□□□□ -1
TPM1-229ENST00000561242 ARPC4P59998 168 aa8.79□□□□□ -1
TPM1-229ENST00000561242 PAX2Q02962 417 aa8.79□□□□□ -1
TPM1-229ENST00000561242 PNLIPRP3Q17RR3 467 aa8.79□□□□□ -1
TPM1-229ENST00000561242 TMEM69Q5SWH9 247 aa8.79□□□□□ -1
TPM1-229ENST00000561242 MINOS1Q5TGZ0 78 aa8.79□□□□□ -1
TPM1-229ENST00000561242 RSBN1Q5VWQ0 802 aaPredicted RBP8.79□□□□□ -1
TPM1-229ENST00000561242 STEAP3Q658P3 488 aa8.79□□□□□ -1
TPM1-229ENST00000561242 SSMEM1Q8WWF3 244 aa8.79□□□□□ -1
TPM1-229ENST00000561242 TNFRSF14Q92956 283 aa8.79□□□□□ -1
TPM1-229ENST00000561242 MALSU1Q96EH3 234 aa8.79□□□□□ -1
TPM1-229ENST00000561242 ARHGAP5-AS1Q96IT6 56 aa8.79□□□□□ -1
TPM1-229ENST00000561242 AKR1E2Q96JD6 320 aa8.79□□□□□ -1
TPM1-229ENST00000561242 CMTM3Q96MX0 182 aa8.79□□□□□ -1
TPM1-229ENST00000561242 TBX15Q96SF7 602 aa8.79□□□□□ -1
TPM1-229ENST00000561242 SLC6A7Q99884 636 aa8.79□□□□□ -1
TPM1-229ENST00000561242 NICN1Q9BSH3 213 aa8.79□□□□□ -1
TPM1-229ENST00000561242 ST6GALNAC5Q9BVH7 336 aa8.79□□□□□ -1
TPM1-229ENST00000561242 RNF167Q9H6Y7 350 aa8.79□□□□□ -1
TPM1-229ENST00000561242 TAF9BQ9HBM6 251 aa8.79□□□□□ -1
TPM1-229ENST00000561242 TNFRSF19Q9NS68 423 aa8.79□□□□□ -1
TPM1-229ENST00000561242 DPM3Q9P2X0 92 aa8.79□□□□□ -1
TPM1-229ENST00000561242 ZNF69Q9UC07 566 aa8.79□□□□□ -1
TPM1-229ENST00000561242 PITPNC1Q9UKF7 332 aa8.79□□□□□ -1
TPM1-229ENST00000561242 MINOS1-NBL1R4GNA1 71 aa8.79□□□□□ -1
TPM1-229ENST00000561242 POLQO75417 2590 aa8.78□□□□□ -1
TPM1-229ENST00000561242 APCP25054 2843 aa8.78□□□□□ -1
TPM1-229ENST00000561242 F2RL2O00254 374 aa8.78□□□□□ -1
TPM1-229ENST00000561242 PEX14O75381 377 aa8.78□□□□□ -1
TPM1-229ENST00000561242 GABARAPO95166 117 aa8.78□□□□□ -1
TPM1-229ENST00000561242 AVPP01185 164 aa8.78□□□□□ -1
TPM1-229ENST00000561242 TFAP2AP05549 437 aa8.78□□□□□ -1
TPM1-229ENST00000561242 CTXN2P0C2S0 81 aa8.78□□□□□ -1
TPM1-229ENST00000561242 IGHV4-38-2P0DP08 117 aa8.78□□□□□ -1
TPM1-229ENST00000561242 CD37P11049 281 aa8.78□□□□□ -1
TPM1-229ENST00000561242 HIST1H1DP16402 221 aaKnown RBP8.78□□□□□ -1
TPM1-229ENST00000561242 GNB3P16520 340 aa8.78□□□□□ -1
TPM1-229ENST00000561242 HOXB4P17483 251 aaPredicted RBP8.78□□□□□ -1
TPM1-229ENST00000561242 OR3A3P47888 321 aa8.78□□□□□ -1
TPM1-229ENST00000561242 ALDH3B2P48448 385 aa8.78□□□□□ -1
TPM1-229ENST00000561242 GNG10P50151 68 aa8.78□□□□□ -1
TPM1-229ENST00000561242 ACTG1P63261 375 aa8.78□□□□□ -1
TPM1-229ENST00000561242 CBX3Q13185 183 aa8.78□□□□□ -1
TPM1-229ENST00000561242 UNC119Q13432 240 aa8.78□□□□□ -1
TPM1-229ENST00000561242 FAM89BQ8N5H3 189 aa8.78□□□□□ -1
TPM1-229ENST00000561242 SIGLECL1Q8N7X8 197 aa8.78□□□□□ -1
TPM1-229ENST00000561242 OR52M1Q8NGK5 317 aa8.78□□□□□ -1
TPM1-229ENST00000561242 OR13A1Q8NGR1 328 aa8.78□□□□□ -1
TPM1-229ENST00000561242 OR5R1Q8NH85 324 aa8.78□□□□□ -1
TPM1-229ENST00000561242 OR10J5Q8NHC4 309 aa8.78□□□□□ -1
TPM1-229ENST00000561242 PLPPR1Q8TBJ4 325 aa8.78□□□□□ -1
TPM1-229ENST00000561242 EDARADDQ8WWZ3 215 aa8.78□□□□□ -1
TPM1-229ENST00000561242 COQ2Q96H96 371 aa8.78□□□□□ -1
TPM1-229ENST00000561242 SULT4A1Q9BR01 284 aa8.78□□□□□ -1
TPM1-229ENST00000561242 OCSTAMPQ9BR26 566 aa8.78□□□□□ -1
TPM1-229ENST00000561242 KCNK15Q9H427 330 aa8.78□□□□□ -1
TPM1-229ENST00000561242 UNKLQ9H9P5 680 aaKnown RBP8.78□□□□□ -1
TPM1-229ENST00000561242 RCC2Q9P258 522 aaKnown RBP8.78□□□□□ -1
TPM1-229ENST00000561242 RSL24D1Q9UHA3 163 aaKnown RBP8.78□□□□□ -1
TPM1-229ENST00000561242 AK3Q9UIJ7 227 aa8.78□□□□□ -1
TPM1-229ENST00000561242 ZNF221Q9UK13 617 aa8.78□□□□□ -1
TPM1-229ENST00000561242 FBN2P35556 2912 aa8.77□□□□□ -1
TPM1-229ENST00000561242 IGHV2-26A0A0B4J1V2 119 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 A0A0B4J203 849 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 TRAV39A0A0B4J263 110 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 TRDCB7Z8K6 153 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 HBZP02008 142 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 MMP9P14780 707 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 CFPP27918 469 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 SAA4P35542 130 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 RAB7AP51149 207 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 PAX5Q02548 391 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 KLRD1Q13241 179 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 MADCAM1Q13477 382 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 SSX2Q16385 188 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 RUSC1-AS1Q66K80 236 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 CRIP3Q6Q6R5 217 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 LYPD6Q86Y78 171 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 OR2AK2Q8NG84 335 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 TOMM40LQ969M1 308 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 S1PR3Q99500 378 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 GFI1Q99684 422 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 C6orf62Q9GZU0 229 aaPredicted RBP8.77□□□□□ -1.01
TPM1-229ENST00000561242 GHITMQ9H3K2 345 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 RABL2AQ9UBK7 228 aaPredicted RBP8.77□□□□□ -1.01
TPM1-229ENST00000561242 RABL2BQ9UNT1 228 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 HILPDAQ9Y5L2 63 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 CRYBG3Q68DQ2 2970 aa8.77□□□□□ -1.01
TPM1-229ENST00000561242 CENPEQ02224 2701 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 FAM172BPA6NC97 362 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 OOSP1A8MZH6 123 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 RNASEK-C17orf49H0YIS7 233 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 HAX1O00165 279 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 DIRAS3O95661 229 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 GAPDHP04406 335 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms