RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ZNF561Q8N587 486 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 ASCC1Q8N9N2 400 aaKnown RBP14.34□□□□□ -0.11
HDDC3-206ENST00000561036 CCDC71LQ8N9Z2 235 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 OR5T2Q8NGG2 359 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 OR5D13Q8NGL4 314 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 OR5M8Q8NGP6 311 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 NEUROG1Q92886 237 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 TOMM40LQ969M1 308 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 SDSLQ96GA7 329 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 COQ2Q96H96 371 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 LURAP1Q96LR2 239 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 SAP30LQ9HAJ7 183 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 KIF25Q9UIL4 384 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 CHD3Q12873 2000 aaKnown RBP14.34□□□□□ -0.11
HDDC3-206ENST00000561036 ZZEF1O43149 2961 aa14.34□□□□□ -0.11
HDDC3-206ENST00000561036 K7N7A8 449 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 ZG16O60844 167 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 PLAUP00749 431 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 CD80P33681 288 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 GABRA2P47869 451 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 NKX2-5P52952 324 aaPredicted RBP14.33□□□□□ -0.12
HDDC3-206ENST00000561036 KCNJ8Q15842 424 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 C2orf68Q2NKX9 166 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 KRBOX4Q5JUW0 171 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 OR2T35Q8NGX2 323 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 CASTOR1Q8WTX7 329 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 KIRREL1Q96J84 757 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 CHIAQ9BZP6 476 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 FAM234AQ9H0X4 552 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 TAF9BQ9HBM6 251 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 METRNQ9UJH8 293 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 KCNIP3Q9Y2W7 256 aa14.33□□□□□ -0.12
HDDC3-206ENST00000561036 IGHV3OR15-7A0A075B7D8 119 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 CYB5R3P00387 301 aaPredicted RBP14.32□□□□□ -0.12
HDDC3-206ENST00000561036 DNASE1P24855 282 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 H2BFSP57053 126 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 PIGPP57054 158 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 RND3P61587 244 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 SNRPD2P62316 118 aaKnown RBP14.32□□□□□ -0.12
HDDC3-206ENST00000561036 HOXA4Q00056 320 aaPredicted RBP14.32□□□□□ -0.12
HDDC3-206ENST00000561036 AESQ08117 197 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 CR1LQ2VPA4 569 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 MUC15Q8N387 334 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 ZNF565Q8N9K5 539 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 GALNT14Q96FL9 552 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 VRK1Q99986 396 aaPredicted RBP14.32□□□□□ -0.12
HDDC3-206ENST00000561036 DNTTIP1Q9H147 329 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 NAA60Q9H7X0 242 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 RAB18Q9NP72 206 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 OR2W1Q9Y3N9 320 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 HCFC1P51610 2035 aa14.32□□□□□ -0.12
HDDC3-206ENST00000561036 PLCE1Q9P212 2302 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 TRAV38-1A0A0B4J264 116 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 TEX13DA0A0J9YY54 714 aaPredicted RBP14.31□□□□□ -0.12
HDDC3-206ENST00000561036 SMLR1H3BR10 107 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 LGALS8O00214 317 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 HEXAP06865 529 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 LY6G6FQ5SQ64 297 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 RTN4IP1Q8WWV3 396 aaPredicted RBP14.31□□□□□ -0.12
HDDC3-206ENST00000561036 SUCNR1Q9BXA5 334 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 SLC5A7Q9GZV3 580 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 TOLLIPQ9H0E2 274 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 ZNF665Q9H7R5 613 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 SLC2A9Q9NRM0 540 aa14.31□□□□□ -0.12
HDDC3-206ENST00000561036 ITPR1Q14643 2758 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 C12orf77C9JDV5 145 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 TMEM178BH3BS89 294 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 GPR31O00270 319 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 ZNF205O95201 554 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 CD8AP01732 235 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 GZMHP20718 246 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 RBMXP38159 391 aaKnown RBP14.3□□□□□ -0.12
HDDC3-206ENST00000561036 GLIPR1P48060 266 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 PPOXP50336 477 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 SLC9A3R2Q15599 337 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 ZNF788Q6ZQV5 615 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 KCTD9Q7L273 389 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 GALMQ96C23 342 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 CNTNAP3BQ96NU0 1288 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 CNTNAP3Q9BZ76 1288 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 RAB9BQ9NP90 201 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 MAB21L2Q9Y586 359 aa14.3□□□□□ -0.12
HDDC3-206ENST00000561036 TRAV39A0A0B4J263 110 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 ODAMA1E959 279 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 NKX6-3A6NJ46 265 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 G3V3Q6 166 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 HSPA12AO43301 675 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 SIX6O95475 246 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 TFF1P04155 84 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 S100GP29377 79 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 GNRHRP30968 328 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 IL2RGP31785 369 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 P2RX3P56373 397 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 CYCSP99999 105 aaKnown RBP14.29□□□□□ -0.12
HDDC3-206ENST00000561036 ANKRD55Q3KP44 614 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 DCAF12L2Q5VW00 463 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 C5orf24Q7Z6I8 188 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 LDLRAD3Q86YD5 345 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 CMTM1Q8IZ96 169 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 ZCCHC24Q8N2G6 241 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms