RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GTF2F2P13984 249 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 IGFBP3P17936 291 aaPredicted RBP12.83□□□□□ -0.36
SNX1-213ENST00000561026 MYL12AP19105 171 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 SERPINA2P20848 420 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 ZNF816Q0VGE8 651 aaPredicted RBP12.83□□□□□ -0.36
SNX1-213ENST00000561026 RIPK1Q13546 671 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 MPV17LQ2QL34 196 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 OR52M1Q8NGK5 317 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 OR13C5Q8NGS8 318 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 CHPT1Q8WUD6 406 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 NOL4LQ96MY1 436 aaPredicted RBP12.83□□□□□ -0.36
SNX1-213ENST00000561026 ZNF184Q99676 751 aaPredicted RBP12.83□□□□□ -0.36
SNX1-213ENST00000561026 CLEC2DQ9UHP7 191 aa12.83□□□□□ -0.36
SNX1-213ENST00000561026 EXOSC1Q9Y3B2 195 aaKnown RBP12.83□□□□□ -0.36
SNX1-213ENST00000561026 TRBV5-5A0A0J9YX44 114 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 CCRL2O00421 344 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 HSD17B6O14756 317 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 GPX5O75715 221 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 MPIG6BO95866 241 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
SNX1-213ENST00000561026 EBI3Q14213 229 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 SLC22A6Q4U2R8 563 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 ATAD3CQ5T2N8 411 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 DMKNQ6E0U4 476 aaPredicted RBP12.82□□□□□ -0.36
SNX1-213ENST00000561026 LINC00482Q8N8I6 264 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 C8orf31Q8N9H6 132 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 ARL11Q969Q4 196 aa12.82□□□□□ -0.36
SNX1-213ENST00000561026 IGHV1-3A0A0C4DH29 117 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 A0A1W2PP11 408 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 MAGEA13PA6NCF6 341 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 SERPINE3A8MV23 424 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 SDCBPO00560 298 aaPredicted RBP12.81□□□□□ -0.36
SNX1-213ENST00000561026 ORC5O43913 435 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 IGHG2P01859 326 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 MT-ND4P03905 459 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 RPS11P62280 158 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX1-213ENST00000561026 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
SNX1-213ENST00000561026 GPR176Q14439 515 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 Q499Y3 187 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 YIF1BQ5BJH7 314 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 MOB3BQ86TA1 216 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 ZNF485Q8NCK3 441 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 CCDC107Q8WV48 283 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 TMEM80Q96HE8 168 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 CHCHD3Q9NX63 227 aaKnown RBP12.81□□□□□ -0.36
SNX1-213ENST00000561026 CKLFQ9UBR5 152 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 TRAV8-7A0A075B6U6 113 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 K7EIL1 84 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 EBAG9O00559 213 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 REG1BP48304 166 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 KRTAP10-11P60412 298 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 MED21Q13503 144 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 TTC23Q5W5X9 447 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
SNX1-213ENST00000561026 ETV3LQ6ZN32 361 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 OR2W3Q7Z3T1 314 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 SLC35E3Q7Z769 313 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 MRPL41Q8IXM3 137 aaKnown RBP12.81□□□□□ -0.36
SNX1-213ENST00000561026 OR51D1Q8NGF3 324 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 UBALD1Q8TB05 177 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 NEK7Q8TDX7 302 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 EAF1Q96JC9 268 aaPredicted RBP12.81□□□□□ -0.36
SNX1-213ENST00000561026 PGLYRP3Q96LB9 341 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 SPACA1Q9HBV2 294 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 ZFP57Q9NU63 452 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 GFOD1Q9NXC2 390 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 LINC00527Q9UJ94 153 aa12.81□□□□□ -0.36
SNX1-213ENST00000561026 IGHV3-72A0A0B4J1Y9 119 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 AIPO00170 330 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 SLC6A1P30531 599 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 THBS3P49746 956 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 EGFEM1PQ0D2K5 195 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 LRRC36Q1X8D7 754 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 TGIF2LXQ8IUE1 241 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 FOXRED2Q8IWF2 684 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 IZUMO1Q8IYV9 350 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 STX19Q8N4C7 294 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 Q8N6K4 173 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 ZFP41Q8N8Y5 198 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 CYGBQ8WWM9 190 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 GGHQ92820 318 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 ST6GALNAC6Q969X2 333 aa12.8□□□□□ -0.36
SNX1-213ENST00000561026 MRPS24Q96EL2 167 aaKnown RBP12.8□□□□□ -0.36
SNX1-213ENST00000561026 RCC2Q9P258 522 aaKnown RBP12.8□□□□□ -0.36
SNX1-213ENST00000561026 MRPS28Q9Y2Q9 187 aaKnown RBP12.8□□□□□ -0.36
SNX1-213ENST00000561026 TRBV5-7A0A0A0MS05 114 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 LINC01548A6NM66 108 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 NCBP2LA6PVI3 153 aaKnown RBP12.79□□□□□ -0.36
SNX1-213ENST00000561026 MCRIP1C9JLW8 97 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 FSTP19883 344 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 SLC35B1P78383 322 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 ST3GAL4Q11206 333 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 Q3ZCU0 254 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 GLIPR1L1Q6UWM5 242 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 C18orf65Q6ZTR6 163 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 STPG2Q8N412 459 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 JAGN1Q8N5M9 183 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms