RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 P2RX3P56373 397 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 RAB25P57735 213 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 ARPC4P59998 168 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 SCGB2B2Q4G0G5 96 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 IGSF11Q5DX21 431 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 ZNF554Q86TJ5 538 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 FAM216BQ8N7L0 139 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 ASCC1Q8N9N2 400 aaKnown RBP9.39□□□□□ -0.91
SNX1-212ENST00000560861 ZNRF1Q8ND25 227 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 OR4A4PQ8NGN8 299 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 CCDC107Q8WV48 283 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 GIMAP1Q8WWP7 306 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 FXYD6Q9H0Q3 95 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 ALX4Q9H161 411 aaPredicted RBP9.39□□□□□ -0.91
SNX1-212ENST00000560861 ZNF665Q9H7R5 613 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 DLL4Q9NR61 685 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 NECAP2Q9NVZ3 263 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 LRBAP50851 2863 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 TRBV6-7A0A0A0MS04 114 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 ODAMA1E959 279 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 C12orf77C9JDV5 145 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 C15orf65H3BRN8 121 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 PRAF2O60831 178 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 LY6HO94772 140 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 IFNA6P05013 189 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 ANXA7P20073 488 aaKnown RBP9.38□□□□□ -0.91
SNX1-212ENST00000560861 FPR2P25090 351 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 IL13RA1P78552 427 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 SURF2Q15527 256 aaPredicted RBP9.38□□□□□ -0.91
SNX1-212ENST00000560861 HFEQ30201 348 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 LYPD2Q6UXB3 125 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 TCF23Q7RTU1 214 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 TMEM17Q86X19 198 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 FGFRL1Q8N441 504 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 OR13A1Q8NGR1 328 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 PPP1R35Q8TAP8 253 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 MARCH1Q8TCQ1 289 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 MED30Q96HR3 178 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 TMEM246Q9BRR3 403 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 DCTN5Q9BTE1 182 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 TOLLIPQ9H0E2 274 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 CTSZQ9UBR2 303 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 DOCK11Q5JSL3 2073 aa9.38□□□□□ -0.91
SNX1-212ENST00000560861 MEIKINA0A087WXM9 373 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 A0A0A6YYJ9 748 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 NKX6-3A6NJ46 265 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 DHFRP00374 187 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 CTXN2P0C2S0 81 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 TRAPPC2P0DI81 140 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 TRAPPC2BP0DI82 140 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 CDKN1AP38936 164 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 NPY4RP50391 375 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 SP5Q6BEB4 398 aaPredicted RBP9.37□□□□□ -0.91
SNX1-212ENST00000560861 GLDNQ6ZMI3 551 aaPredicted RBP9.37□□□□□ -0.91
SNX1-212ENST00000560861 SLC25A42Q86VD7 318 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 LDLRAD3Q86YD5 345 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 H1FOOQ8IZA3 346 aaPredicted RBP9.37□□□□□ -0.91
SNX1-212ENST00000560861 TPRX1Q8N7U7 411 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 OR5D13Q8NGL4 314 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 OR6F1Q8NGZ6 308 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 TMEM230Q96A57 120 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 MOB3AQ96BX8 217 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 LURAP1Q96LR2 239 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 NEURL2Q9BR09 285 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 ZNF2Q9BSG1 426 aaPredicted RBP9.37□□□□□ -0.91
SNX1-212ENST00000560861 RTBDNQ9BSG5 229 aaPredicted RBP9.37□□□□□ -0.91
SNX1-212ENST00000560861 CLEC4MQ9H2X3 399 aaPredicted RBP9.37□□□□□ -0.91
SNX1-212ENST00000560861 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 TAF9BQ9HBM6 251 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 ING3Q9NXR8 418 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 OPN4Q9UHM6 478 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 TRAPPC2LQ9UL33 140 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 PCDHB10Q9UN67 800 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 MALRD1Q5VYJ5 2156 aa9.37□□□□□ -0.91
SNX1-212ENST00000560861 NDUFA2O43678 99 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 NDUFS7O75251 213 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
SNX1-212ENST00000560861 HEXAP06865 529 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 DAOP14920 347 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 AADACP22760 399 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 FCGR2CP31995 323 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 GLP1RP43220 463 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 EFNA4P52798 201 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 UCP3P55916 312 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 TSPAN5P62079 268 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 DHODHQ02127 395 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 C6orf183Q5T699 404 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 TMEM185AQ8NFB2 350 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 OR1L1Q8NH94 360 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 MRGPRDQ8TDS7 321 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 CAPSLQ8WWF8 208 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 CORO2AQ92828 525 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 C14orf79Q96F83 325 aa9.36□□□□□ -0.91
SNX1-212ENST00000560861 KIRREL1Q96J84 757 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms