RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ADAP1O75689 374 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 IGKV1-13P0DP09 117 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 SLC25A4P12235 298 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 CXCL2P19875 107 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 TMEM187Q14656 261 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 PPP1R1CQ8WVI7 109 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 PLPPR2Q96GM1 343 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 HEXA-AS1Q9H8Q6 139 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 TAF9BQ9HBM6 251 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 DNAJB11Q9UBS4 358 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 CHD8Q9HCK8 2581 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 NKX2-6A6NCS4 301 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 GPR31O00270 319 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 HEXAP06865 529 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 C4BPBP20851 252 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 TESK1Q15569 626 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 PHLDA2Q53GA4 152 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 FAM209AQ5JX71 171 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 ZNF565Q8N9K5 539 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 OR11L1Q8NGX0 322 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 SNX22Q96L94 193 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 TOLLIPQ9H0E2 274 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 KCNIP1Q9NZI2 227 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 COMMD9Q9P000 198 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 KIF25Q9UIL4 384 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 ERRFI1Q9UJM3 462 aaPredicted RBP10.81□□□□□ -0.68
SNX1-211ENST00000560829 SPTA1P02549 2419 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 SHANK1Q9Y566 2161 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 FXYD6-FXYD2A0A087WZ82 144 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 TRAV39A0A0B4J263 110 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.81□□□□□ -0.68
SNX1-211ENST00000560829 C5orf51A6NDU8 294 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 OOEPA6NGQ2 149 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 FAM25EA8MYX2 175 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 E7EQL1 145 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 M0R233 179 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 MPPED1O15442 326 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 CD3EP07766 207 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 OR5AC1P0C628 307 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 RPA2P15927 270 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 TNFRSF1AP19438 455 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 AESQ08117 197 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 IL15RAQ13261 267 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 CDSNQ15517 529 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 C11orf87Q6NUJ2 197 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 ZNF818PQ6ZRF7 136 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 ANGPTL6Q8NI99 470 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 PPP1R35Q8TAP8 253 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 SECTM1Q8WVN6 248 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 SLC5A7Q9GZV3 580 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 KCNJ16Q9NPI9 418 aa10.81□□□□□ -0.68
SNX1-211ENST00000560829 ESPL1Q14674 2120 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 C13orf42A0A1B0GVH6 325 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 C12orf77C9JDV5 145 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 L7N2F9 121 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 TFF1P04155 84 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 WNT2P09544 360 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 GABRA2P47869 451 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 EFNB3Q15768 340 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 BEX5Q5H9J7 111 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 KRBOX4Q5JUW0 171 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 C6orf183Q5T699 404 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 LIAT1Q6ZQX7 453 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 LINC01560Q8TB33 94 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 CA5BP1Q8WTZ4 195 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 GLYATL2Q8WU03 294 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 IL1F10Q8WWZ1 152 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 MSI2Q96DH6 328 aaKnown RBP10.8□□□□□ -0.68
SNX1-211ENST00000560829 LURAP1Q96LR2 239 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 C2orf50Q96LR7 162 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 METTL8Q9H825 291 aaKnown RBP10.8□□□□□ -0.68
SNX1-211ENST00000560829 OR1A1Q9P1Q5 309 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 PPP1R3CQ9UQK1 317 aa10.8□□□□□ -0.68
SNX1-211ENST00000560829 MPTX1A8MV57 137 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 MGST3O14880 152 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 ARPC5O15511 151 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 PSMB6P28072 239 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 GRNP28799 593 aaKnown RBP10.79□□□□□ -0.68
SNX1-211ENST00000560829 SSTR2P30874 369 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 SRPXP78539 464 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 TLE1Q04724 770 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 TFF3Q07654 80 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 CR1LQ2VPA4 569 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 TEX36Q5VZQ5 186 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 STUMQ69YW2 141 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 TRAT1Q6PIZ9 186 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 ZNF767PQ75MW2 155 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 CMTM1Q8IZ96 169 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 BVESQ8NE79 360 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 OR10V1Q8NGI7 309 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 SDSLQ96GA7 329 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 OR10C1Q96KK4 312 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 NCOR1P1Q9H4R4 102 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 CCL28Q9NRJ3 127 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 ITPR1Q14643 2758 aa10.79□□□□□ -0.68
SNX1-211ENST00000560829 C3orf85A0A1B0GTC6 90 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 K7N7A8 449 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 MPC2O95563 127 aa10.78□□□□□ -0.68
SNX1-211ENST00000560829 HOXB5P09067 269 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms