RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 CLEC7AQ9BXN2 247 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 TMEM133Q9H2Q1 129 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 KCNK15Q9H427 330 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 NDUFB11Q9NX14 153 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 CALYQ9NYX4 217 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 KCNIP1Q9NZI2 227 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 GHRLQ9UBU3 117 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 HILPDAQ9Y5L2 63 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 V9GY05 133 aa6.52□□□□□ -1.37
LRRC28-219ENST00000560483 FBN1P35555 2871 aaKnown RBP6.51□□□□□ -1.37
LRRC28-219ENST00000560483 A0A075B6Q4 140 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 IGHV2-26A0A0B4J1V2 119 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 F2RL2O00254 374 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 BPNT1O95861 308 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 CSN2P05814 226 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 RAB3BP20337 219 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 FUT3P21217 361 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 SSTR5P35346 364 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 PRRX1P54821 245 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 FOXL1Q12952 345 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 SSX1Q16384 188 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 LRRC75BQ2VPJ9 315 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 UBE2UQ5VVX9 321 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 ASCL4Q6XD76 172 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 TMEM91Q6ZNR0 172 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 GDPGP1Q6ZNW5 385 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 LCNL1Q6ZST4 164 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 LHFPL4Q7Z7J7 247 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 C1QL4Q86Z23 238 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 TSPAN14Q8NG11 270 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 OR13A1Q8NGR1 328 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 OR10X1Q8NGY0 326 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 OR5R1Q8NH85 324 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 SPATA3Q8NHX4 192 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 PLPPR1Q8TBJ4 325 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 ZNF596Q8TC21 504 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 C17orf50Q8WW18 174 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 DYRK2Q92630 601 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 TAF15Q92804 592 aaKnown RBP eCLIP6.51□□□□□ -1.37
LRRC28-219ENST00000560483 TNFRSF14Q92956 283 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 ARL11Q969Q4 196 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 COQ2Q96H96 371 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 CHCHD6Q9BRQ6 235 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 CHIAQ9BZP6 476 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 SEBOXQ9HB31 216 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-219ENST00000560483 RAB9BQ9NP90 201 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 PLEKHJ1Q9NW61 149 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 TAS2R3Q9NYW6 316 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 IDI2-AS1Q9NZ38 188 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 ZNF581Q9P0T4 197 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 ZNRD1Q9P1U0 126 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 STUB1Q9UNE7 303 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 POMT1Q9Y6A1 747 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 COL6A5A8TX70 2615 aa6.51□□□□□ -1.37
LRRC28-219ENST00000560483 A0A087WXM4 84 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 IGHV3-43A0A0B4J1X8 118 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 KBTBD11-OT1A0A1B0GTJ5 212 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 TRDV1A0A1B0GX56 115 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 SDCBPO00560 298 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-219ENST00000560483 SLC17A2O00624 439 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 SPINT2O43291 252 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 PDCD6O75340 191 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 PEX14O75381 377 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 MMP23AO75900 390 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 RBP4P02753 201 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 IGHV3-43DP0DP04 118 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 CD36P16671 472 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 HTR1DP28221 377 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 BLVRBP30043 206 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-219ENST00000560483 IER3P46695 156 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 VEGFCP49767 419 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 DLX6P56179 175 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 MXD1Q05195 221 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 KCTD21Q4G0X4 260 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 NHLRC3Q5JS37 347 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 C6orf183Q5T699 404 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 SYT6Q5T7P8 510 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-219ENST00000560483 RSBN1Q5VWQ0 802 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-219ENST00000560483 SLC35E4Q6ICL7 350 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 HEPN1Q6WQI6 88 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 TCF23Q7RTU1 214 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 RTN4RL2Q86UN3 420 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 TMEM86BQ8N661 226 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 BEND2Q8NDZ0 799 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 OR51D1Q8NGF3 324 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 LEAP2Q969E1 77 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 RPEQ96AT9 228 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 FAM3DQ96BQ1 224 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 Q96M66 194 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 UNKLQ9H9P5 680 aaKnown RBP6.5□□□□□ -1.37
LRRC28-219ENST00000560483 GNG12Q9UBI6 72 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 STEAP1Q9UHE8 339 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 VPREB3Q9UKI3 123 aa6.5□□□□□ -1.37
LRRC28-219ENST00000560483 TBL2Q9Y4P3 447 aaKnown RBP6.5□□□□□ -1.37
LRRC28-219ENST00000560483 AMMECR1Q9Y4X0 333 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-219ENST00000560483 A0A1W2PPE3 182 aa6.49□□□□□ -1.37
LRRC28-219ENST00000560483 FAM90A10PA6NDY2 464 aa6.49□□□□□ -1.37
LRRC28-219ENST00000560483 FAM90A18PA6NE21 464 aa6.49□□□□□ -1.37
LRRC28-219ENST00000560483 FAM90A16PA6NEW6 464 aa6.49□□□□□ -1.37
LRRC28-219ENST00000560483 FAM90A20PA6NIJ5 464 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms