RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 OR52M1Q8NGK5 317 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 TSEN15Q8WW01 171 aaKnown RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 DUX3Q96PT4 197 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 S100A13Q99584 98 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 CHCHD6Q9BRQ6 235 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 ALG8Q9BVK2 526 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 DPCDQ9BVM2 203 aaPredicted RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 METTL9Q9H1A3 318 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 PAK1IP1Q9NWT1 392 aaPredicted RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 IGHV3-72A0A0B4J1Y9 119 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 A0A1W2PPE3 182 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 TMEM30CPA0ZSE6 113 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 SEC14L6B5MCN3 397 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 SDCBPO00560 298 aaPredicted RBP7.2□□□□□ -1.26
HDDC3-204ENST00000559834 ORC5O43913 435 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 ATP5HO75947 161 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 CD2P06729 351 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 OR5H8P0DN80 308 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 VDAC1P21796 283 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 SSTR5P35346 364 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 REG1BP48304 166 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 Q3ZCU0 254 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 ASCL4Q6XD76 172 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 STX19Q8N4C7 294 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 LINC00311Q8N616 119 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 Q8N6K4 173 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 RNF152Q8N8N0 203 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 Q8N9W7 124 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 SUMF2Q8NBJ7 301 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 OR52N1Q8NH53 320 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 PLPPR1Q8TBJ4 325 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 ARL11Q969Q4 196 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 LGALS12Q96DT0 336 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 Q96MT0 163 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 JAM3Q9BX67 310 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 FAM192AQ9GZU8 254 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 IFT22Q9H7X7 185 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 RAB9BQ9NP90 201 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 ING4Q9UNL4 249 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 ST3GAL6Q9Y274 331 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 NBEAL2Q6ZNJ1 2754 aa7.2□□□□□ -1.26
HDDC3-204ENST00000559834 TRAV39A0A0B4J263 110 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 SAC3D1A6NKF1 404 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 GABRPO00591 440 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 TXNL1O43396 289 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 ZNF780AO75290 641 aaPredicted RBP7.19□□□□□ -1.26
HDDC3-204ENST00000559834 OR7C1O76099 320 aaPredicted RBP7.19□□□□□ -1.26
HDDC3-204ENST00000559834 SOX6P35712 828 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 INSL3P51460 131 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
HDDC3-204ENST00000559834 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 ZNF260Q3ZCT1 412 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 NHLRC3Q5JS37 347 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 ATAD3CQ5T2N8 411 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 LPCAT4Q643R3 524 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 ZNF529Q6P280 563 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 TMEM65Q6PI78 240 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 LINC00596Q86U02 117 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 OR10K1Q8NGX5 313 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 GPR148Q8TDV2 347 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 NEK7Q8TDX7 302 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 C4orf3Q8WVX3 66 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 RTN4IP1Q8WWV3 396 aaPredicted RBP7.19□□□□□ -1.26
HDDC3-204ENST00000559834 PRR25Q96S07 402 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 S1PR3Q99500 378 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 PDCD1LG2Q9BQ51 273 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 ISG20L2Q9H9L3 353 aaKnown RBP7.19□□□□□ -1.26
HDDC3-204ENST00000559834 TMEM138Q9NPI0 162 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 PLSCR3Q9NRY6 295 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 GFOD1Q9NXC2 390 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 IL36GQ9NZH8 169 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
HDDC3-204ENST00000559834 ZNF256Q9Y2P7 627 aaPredicted RBP7.19□□□□□ -1.26
HDDC3-204ENST00000559834 C15orf65H3BRN8 121 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 SPINT2O43291 252 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 CIB2O75838 187 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 CDRT1O95170 752 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 IGHG4P01861 327 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 IGF1P05019 195 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 ALPLP05186 524 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 OR8U8P0C7N1 319 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 CHATP28329 748 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 ZNF93P35789 620 aaPredicted RBP7.18□□□□□ -1.26
HDDC3-204ENST00000559834 SOX2P48431 317 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 RBM11P57052 281 aaKnown RBP7.18□□□□□ -1.26
HDDC3-204ENST00000559834 PPP3R1P63098 170 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 RAB40BQ12829 278 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 GPR176Q14439 515 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 MPV17LQ2QL34 196 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 DEFB136Q30KP8 78 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 TMEM30BQ3MIR4 351 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 ZIK1Q3SY52 487 aaPredicted RBP7.18□□□□□ -1.26
HDDC3-204ENST00000559834 STEAP3Q658P3 488 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 OR11H1Q8NG94 326 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 CCDC107Q8WV48 283 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 ST6GALNAC6Q969X2 333 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 ASCL2Q99929 193 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 SPACA1Q9HBV2 294 aa7.18□□□□□ -1.26
HDDC3-204ENST00000559834 ERVK13-1Q9NX77 482 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms