RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TNFAIP8L1Q8WVP5 186 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 TSEN15Q8WW01 171 aaKnown RBP10.28□□□□□ -0.76
TPM1-220ENST00000559556 GPER1Q99527 375 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 PDCD1LG2Q9BQ51 273 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 DPCDQ9BVM2 203 aaPredicted RBP10.28□□□□□ -0.76
TPM1-220ENST00000559556 GON7Q9BXV9 100 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 DCLRE1BQ9H816 532 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 ORC6Q9Y5N6 252 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 U3KQK5 164 aa10.28□□□□□ -0.76
TPM1-220ENST00000559556 TRAV39A0A0B4J263 110 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 A0A1W2PPE3 182 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 E9PI62 339 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 CCRL2O00421 344 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 EI24O14681 340 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 MPZL2O60487 215 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 GABRB1P18505 474 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 GZMHP20718 246 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 CDX1P47902 265 aaPredicted RBP10.27□□□□□ -0.77
TPM1-220ENST00000559556 LUMP51884 338 aaPredicted RBP10.27□□□□□ -0.77
TPM1-220ENST00000559556 RBM11P57052 281 aaKnown RBP10.27□□□□□ -0.77
TPM1-220ENST00000559556 RAB25P57735 213 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 GPR50Q13585 617 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 PNLIPRP3Q17RR3 467 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 CXorf66Q5JRM2 361 aaPredicted RBP10.27□□□□□ -0.77
TPM1-220ENST00000559556 NKAPLQ5M9Q1 402 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 C9orf66Q5T8R8 295 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 MOB3BQ86TA1 216 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 SUMF2Q8NBJ7 301 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 OR5M8Q8NGP6 311 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 OR10K1Q8NGX5 313 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 RTN4IP1Q8WWV3 396 aaPredicted RBP10.27□□□□□ -0.77
TPM1-220ENST00000559556 ST6GALNAC6Q969X2 333 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 FAM118AQ9NWS6 357 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 ERVK13-1Q9NX77 482 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 IL36GQ9NZH8 169 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 ZNF581Q9P0T4 197 aa10.27□□□□□ -0.77
TPM1-220ENST00000559556 DNAH1Q9P2D7 4330 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
TPM1-220ENST00000559556 C15orf65H3BRN8 121 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 MAGEB3O15480 346 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 HTR3BO95264 441 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 ELANEP08246 267 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 REG1BP48304 166 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 CFHR3Q02985 330 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 FHL3Q13643 280 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 KIR2DS1Q14954 304 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 KLHL22Q53GT1 634 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 LCNL1Q6ZST4 164 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 LINC00596Q86U02 117 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 SATL1Q86VE3 508 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 FAM71E2Q8N5Q1 922 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 RGP1Q92546 391 aaPredicted RBP10.26□□□□□ -0.77
TPM1-220ENST00000559556 JAM3Q9BX67 310 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 PLSCR3Q9NRY6 295 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 GFOD1Q9NXC2 390 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 AASSQ9UDR5 926 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 ZNF580Q9UK33 172 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 ST3GAL6Q9Y274 331 aa10.26□□□□□ -0.77
TPM1-220ENST00000559556 STARD9Q9P2P6 4700 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 RYR2Q92736 4967 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 TMEM30CPA0ZSE6 113 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 OR7C1O76099 320 aaPredicted RBP10.25□□□□□ -0.77
TPM1-220ENST00000559556 FADS2O95864 444 aaKnown RBP10.25□□□□□ -0.77
TPM1-220ENST00000559556 IGHG4P01861 327 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 CD1BP29016 333 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 ALDH3A2P51648 485 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 ZNF137PP52743 207 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 ZIK1Q3SY52 487 aaPredicted RBP10.25□□□□□ -0.77
TPM1-220ENST00000559556 Q3ZCU0 254 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 C4orf3Q8WVX3 66 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 ARL11Q969Q4 196 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 PRR25Q96S07 402 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 TAS2R4Q9NYW5 299 aa10.25□□□□□ -0.77
TPM1-220ENST00000559556 SIRT4Q9Y6E7 314 aaPredicted RBP10.25□□□□□ -0.77
TPM1-220ENST00000559556 SEC14L6B5MCN3 397 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 SDCBPO00560 298 aaPredicted RBP10.24□□□□□ -0.77
TPM1-220ENST00000559556 GEMIN2O14893 280 aaKnown RBP10.24□□□□□ -0.77
TPM1-220ENST00000559556 TXNL1O43396 289 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 ORC5O43913 435 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 CDRT1O95170 752 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 MOSP00540 346 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 CD2P06729 351 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 IL3RAP26951 378 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 PSMB8P28062 276 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 SOX2P48431 317 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 GBX2P52951 348 aaPredicted RBP10.24□□□□□ -0.77
TPM1-220ENST00000559556 RAB40BQ12829 278 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 MPV17LQ2QL34 196 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 ZNF497Q6ZNH5 498 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 OR8H1Q8NGG4 311 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 OR52N1Q8NH53 320 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 MYOZ3Q8TDC0 251 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 PYDC1Q8WXC3 89 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 TMEM106AQ96A25 262 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 S1PR3Q99500 378 aa10.24□□□□□ -0.77
TPM1-220ENST00000559556 HSPB9Q9BQS6 159 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms