RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RFESDQ8TAC1 157 aa16.51■□□□□ 0.23
TSPAN3-207ENST00000559494 C17orf50Q8WW18 174 aa16.51■□□□□ 0.23
TSPAN3-207ENST00000559494 TMEM133Q9H2Q1 129 aa16.51■□□□□ 0.23
TSPAN3-207ENST00000559494 PLEKHJ1Q9NW61 149 aa16.51■□□□□ 0.23
TSPAN3-207ENST00000559494 SCOCQ9UIL1 159 aa16.51■□□□□ 0.23
TSPAN3-207ENST00000559494 VBP1P61758 197 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 NCS1P62166 190 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 MOGAT2Q3SYC2 334 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 MIDNQ504T8 468 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 UTF1Q5T230 341 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 RBMS3Q6XE24 437 aaKnown RBP16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 GPR141Q7Z602 305 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 OR56B1Q8NGI3 324 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 PTX4Q96A99 478 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 ARHGAP5-AS1Q96IT6 56 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 HSF4Q9ULV5 492 aa16.5■□□□□ 0.23
TSPAN3-207ENST00000559494 C15orf65H3BRN8 121 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 IL1AP01583 271 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 SSTR5P35346 364 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 RPL5P46777 297 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 KRTAP21-3Q3LHN1 58 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 PLAC9Q5JTB6 97 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 IDNKQ5T6J7 187 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 GPR107Q5VW38 600 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 OR52W1Q6IF63 320 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 Q6YL49 198 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 Q6ZTK2 550 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 MRPL30Q8TCC3 161 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 ZDHHC16Q969W1 377 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 KIRREL1Q96J84 757 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 PECRQ9BY49 303 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 IDI2-AS1Q9NZ38 188 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 TRAPPC2LQ9UL33 140 aa16.49■□□□□ 0.23
TSPAN3-207ENST00000559494 IGHV2-26A0A0B4J1V2 119 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 FAM172BPA6NC97 362 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 ODF3BA8MYP8 253 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 RAB27BO00194 218 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 ORC5O43913 435 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 ARG1P05089 322 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 RCC1P18754 421 aaPredicted RBP16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 BAMBIQ13145 260 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 CTF1Q16619 201 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 LDLRAD2Q5SZI1 272 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 ZNF626Q68DY1 528 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 C5orf24Q7Z6I8 188 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 ABHD12Q8N2K0 398 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 OR5H6Q8NGV6 325 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 UBALD1Q8TB05 177 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 LGALS14Q8TCE9 139 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 ARL11Q969Q4 196 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 DUX5Q96PT3 197 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 CLEC7AQ9BXN2 247 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 FAM96BQ9Y3D0 163 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 COL6A5A8TX70 2615 aa16.48■□□□□ 0.23
TSPAN3-207ENST00000559494 A0A087X0M5 115 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 A0A1B0GX30 115 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 GABARAPO95166 117 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 NFYBP25208 207 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 CD34P28906 385 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 SERPINB10P48595 397 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 LGALS4P56470 323 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 DYNC1I2Q13409 638 aaKnown RBP16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 LTC4SQ16873 150 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 Q6ZPA2 131 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 LHFPL4Q7Z7J7 247 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 OR10R2Q8NGX6 335 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 JMJD8Q96S16 334 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 ATG5Q9H1Y0 275 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 ZNF286AQ9HBT8 521 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 MBNL3Q9NUK0 354 aaKnown RBP16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 AK3Q9UIJ7 227 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 KCNK7Q9Y2U2 307 aa16.47■□□□□ 0.23
TSPAN3-207ENST00000559494 METTL21EPA6NDL7 271 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 C12orf77C9JDV5 145 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 NAPSAO96009 420 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 MELTFP08582 738 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 PAX6P26367 422 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 FAM189A2Q15884 450 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 OLFML2AQ68BL7 652 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 OR10A7Q8NGE5 316 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 RAB3CQ96E17 227 aa16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 HDHD3Q9BSH5 251 aaPredicted RBP16.46■□□□□ 0.23
TSPAN3-207ENST00000559494 DNAJC9-AS1A6NH13 148 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 HOXA3O43365 443 aaPredicted RBP16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 FBP1P09467 338 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 SLC9A3R2Q15599 337 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 C6orf183Q5T699 404 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 CROCCP3Q8IVE0 287 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 LEAP2Q969E1 77 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 MEGF9Q9H1U4 602 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 F2RL2O00254 374 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 TMEM127O75204 238 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 IGLV1-47P01700 117 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 IGHV3-7P01780 117 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 SCAND1P57086 179 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 UBA52P62987 128 aaKnown RBP16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 KRTAP24-1Q3LI83 254 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 FAM53AQ6NSI3 398 aaPredicted RBP16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 ZNF880Q6PDB4 577 aa16.45■□□□□ 0.22
TSPAN3-207ENST00000559494 LDLRAD3Q86YD5 345 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms