RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 RIPK1Q13546 671 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 MPV17LQ2QL34 196 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 OR2G6Q5TZ20 316 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 SLC35E3Q7Z769 313 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 FOXRED2Q8IWF2 684 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 MRPL41Q8IXM3 137 aaKnown RBP11.82□□□□□ -0.52
LRRC28-213ENST00000559399 DPF1Q92782 380 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 NOL4LQ96MY1 436 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-213ENST00000559399 RDH12Q96NR8 316 aa11.82□□□□□ -0.52
LRRC28-213ENST00000559399 SMPD3Q9NY59 655 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-213ENST00000559399 SDCBPO00560 298 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-213ENST00000559399 GAPDHP04406 335 aaKnown RBP11.81□□□□□ -0.52
LRRC28-213ENST00000559399 GTF2F2P13984 249 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 SLC6A1P30531 599 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 REG1BP48304 166 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 SLC22A6Q4U2R8 563 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 ATAD3CQ5T2N8 411 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 OR2W3Q7Z3T1 314 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 MOB3BQ86TA1 216 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 IZUMO1Q8IYV9 350 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 COMMD1Q8N668 190 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 OR52M1Q8NGK5 317 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 NEK7Q8TDX7 302 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 ARL11Q969Q4 196 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 ZFP57Q9NU63 452 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 BABAM2Q9NXR7 383 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 CKLFQ9UBR5 152 aa11.81□□□□□ -0.52
LRRC28-213ENST00000559399 SIRT4Q9Y6E7 314 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-213ENST00000559399 IGHV1-3A0A0C4DH29 117 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 NUDT19A8MXV4 375 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 C15orf65H3BRN8 121 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 OGG1O15527 345 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 IGHG2P01859 326 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 IL3RAP26951 378 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 HOXD3P31249 432 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-213ENST00000559399 THBS3P49746 956 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 EGFEM1PQ0D2K5 195 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 EBI3Q14213 229 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 C8orf86Q6ZUL3 223 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 STX19Q8N4C7 294 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 C8orf31Q8N9H6 132 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 OR13C5Q8NGS8 318 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 GHSRQ92847 366 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 ZNF184Q99676 751 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-213ENST00000559399 DIMT1Q9UNQ2 313 aaKnown RBP11.8□□□□□ -0.52
LRRC28-213ENST00000559399 EXOSC1Q9Y3B2 195 aaKnown RBP11.8□□□□□ -0.52
LRRC28-213ENST00000559399 DSCAML1Q8TD84 2053 aa11.8□□□□□ -0.52
LRRC28-213ENST00000559399 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 TRBV5-5A0A0J9YX44 114 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 WI2-2373I1.2A0A1W2PRP0 233 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 NCBP2LA6PVI3 153 aaKnown RBP11.79□□□□□ -0.52
LRRC28-213ENST00000559399 AIPO00170 330 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 ORC5O43913 435 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 BAG2O95816 211 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 IGFBP3P17936 291 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-213ENST00000559399 MED21Q13503 144 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 GPR176Q14439 515 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 YIF1BQ5BJH7 314 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 ZNF497Q6ZNH5 498 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 STPG2Q8N412 459 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 LINC00311Q8N616 119 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 OR2T10Q8NGZ9 312 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 UBALD1Q8TB05 177 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 CCDC107Q8WV48 283 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 ORAI1Q96D31 301 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 EAF1Q96JC9 268 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-213ENST00000559399 MCRIP2Q9BUT9 160 aaKnown RBP11.79□□□□□ -0.52
LRRC28-213ENST00000559399 SPACA1Q9HBV2 294 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 GFOD1Q9NXC2 390 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 LINC00527Q9UJ94 153 aa11.79□□□□□ -0.52
LRRC28-213ENST00000559399 A0A1W2PP11 408 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 MAGEA13PA6NCF6 341 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 AP4M1O00189 453 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 GPX5O75715 221 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 LALBAP00709 142 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 MT-ND4P03905 459 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 MYCNOSP40205 109 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 GPR12P47775 334 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 Q3ZCU0 254 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 Q499Y3 187 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 DMKNQ6E0U4 476 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-213ENST00000559399 C18orf65Q6ZTR6 163 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 Q8N6K4 173 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 RTN4IP1Q8WWV3 396 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-213ENST00000559399 ABCG5Q9H222 651 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 RAB9BQ9NP90 201 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 LIN7CQ9NUP9 197 aaKnown RBP11.78□□□□□ -0.52
LRRC28-213ENST00000559399 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
LRRC28-213ENST00000559399 RCC2Q9P258 522 aaKnown RBP11.78□□□□□ -0.52
LRRC28-213ENST00000559399 CLEC2DQ9UHP7 191 aa11.78□□□□□ -0.52
LRRC28-213ENST00000559399 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.52
LRRC28-213ENST00000559399 TRAV8-7A0A075B6U6 113 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 IGHV3-43A0A0B4J1X8 118 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 IGHV3-43DP0DP04 118 aa11.77□□□□□ -0.53
LRRC28-213ENST00000559399 FSTP19883 344 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms