RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 PNMA8CA0A1B0GUJ8 204 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 SDCBPO00560 298 aaPredicted RBP16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 BDKRB2P30411 391 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 LRRC36Q1X8D7 754 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 SLC22A6Q4U2R8 563 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 C8orf86Q6ZUL3 223 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 LINC00482Q8N8I6 264 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 S100A13Q99584 98 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 ZNF184Q99676 751 aaPredicted RBP16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 NCOR1P1Q9H4R4 102 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 PCDHB16Q9NRJ7 776 aa16.2■□□□□ 0.18
TSPAN3-206ENST00000559373 IGHV1-3A0A0C4DH29 117 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 CCRL2O00421 344 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 HSD17B6O14756 317 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 OGG1O15527 345 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 RAB7AP51149 207 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 RPL23AP62750 156 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 TMPRSS11AQ6ZMR5 421 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 LCNL1Q6ZST4 164 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 MRPL41Q8IXM3 137 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 GHSRQ92847 366 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 RCC1LQ96I51 464 aaKnown RBP16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 SMPD3Q9NY59 655 aaPredicted RBP16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 ZNF281Q9Y2X9 895 aa16.19■□□□□ 0.18
TSPAN3-206ENST00000559373 TRAV8-7A0A075B6U6 113 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 TMEM30CPA0ZSE6 113 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 NCBP2LA6PVI3 153 aaKnown RBP16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 NUDT19A8MXV4 375 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 ZNF736B4DX44 427 aaPredicted RBP16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 C15orf65H3BRN8 121 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 SLC31A2O15432 143 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 CCDC58Q4VC31 144 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 C11orf87Q6NUJ2 197 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 C5orf24Q7Z6I8 188 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 SLC35E3Q7Z769 313 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 OR8H3Q8N146 312 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 KLHL30-AS1Q8NEE0 82 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 CYGBQ8WWM9 190 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 EAF1Q96JC9 268 aaPredicted RBP16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 BABAM2Q9NXR7 383 aa16.18■□□□□ 0.18
TSPAN3-206ENST00000559373 DCKP27707 260 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 VHLP40337 213 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 KCNJ3P48549 501 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 THBS3P49746 956 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 PAX5Q02548 391 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 RIPK1Q13546 671 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 OR2W3Q7Z3T1 314 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 PRR18Q8N4B5 295 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 CHPT1Q8WUD6 406 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 MUL1Q969V5 352 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 SMIM19Q96E16 107 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 IL36GQ9NZH8 169 aa16.17■□□□□ 0.18
TSPAN3-206ENST00000559373 GAPDHP04406 335 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 IGFBP3P17936 291 aaPredicted RBP16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 MYL12AP19105 171 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 GZMHP20718 246 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 RPS11P62280 158 aaKnown RBP eCLIP16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 ZNF816Q0VGE8 651 aaPredicted RBP16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 NHLRC3Q5JS37 347 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 C10orf67Q8IYJ2 551 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 OR10A7Q8NGE5 316 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 OR10V1Q8NGI7 309 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 OR4K15Q8NH41 348 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 BANF2Q9H503 90 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 IFT22Q9H7X7 185 aa16.16■□□□□ 0.18
TSPAN3-206ENST00000559373 TRBV5-5A0A0J9YX44 114 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 AIPO00170 330 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 FGF16O43320 207 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 MT-ND4P03905 459 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 MAS1P04201 325 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 RAB25P57735 213 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 SYT6Q5T7P8 510 aaPredicted RBP16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 DMKNQ6E0U4 476 aaPredicted RBP16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 ZNF497Q6ZNH5 498 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 STPG2Q8N412 459 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 JAGN1Q8N5M9 183 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 OR14A2Q96R54 314 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 GFOD1Q9NXC2 390 aa16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 DIMT1Q9UNQ2 313 aaKnown RBP16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 MRPS28Q9Y2Q9 187 aaKnown RBP16.15■□□□□ 0.18
TSPAN3-206ENST00000559373 IGHG2P01859 326 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 GTF2F2P13984 249 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 DOC2BQ14184 412 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 MPV17LQ2QL34 196 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 DEFB136Q30KP8 78 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 GLIPR1L1Q6UWM5 242 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 SLC16A12Q6ZSM3 486 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 FOXRED2Q8IWF2 684 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 Q8N9W7 124 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 OR51D1Q8NGF3 324 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 OR1L1Q8NH94 360 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 RTN4IP1Q8WWV3 396 aaPredicted RBP16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 GGHQ92820 318 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 TMEM80Q96HE8 168 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 PGLYRP3Q96LB9 341 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 TRAPPC2LQ9UL33 140 aa16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 EXOSC1Q9Y3B2 195 aaKnown RBP16.14■□□□□ 0.17
TSPAN3-206ENST00000559373 C12orf77C9JDV5 145 aa16.13■□□□□ 0.17
TSPAN3-206ENST00000559373 RPLP1P05386 114 aaKnown RBP16.13■□□□□ 0.17
TSPAN3-206ENST00000559373 ZNF134P52741 427 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms