RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 INSL4Q14641 139 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 ATXN7L3Q14CW9 347 aaPredicted RBP7.88□□□□□ -1.15
SPG11-214ENST00000558989 RSU1Q15404 277 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 C17orf107Q6ZR85 190 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 Q8IYB0 196 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 MFSD4AQ8N468 514 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 KIR3DL3Q8N743 410 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 NANOGP1Q8N7R0 232 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 ZSCAN4Q8NAM6 433 aaPredicted RBP7.88□□□□□ -1.15
SPG11-214ENST00000558989 HAVCR2Q8TDQ0 301 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 TNFRSF14Q92956 283 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 PGLYRP3Q96LB9 341 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 OR5M11Q96RB7 305 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 CHIAQ9BZP6 476 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 VCX3BQ9H321 246 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 METTL8Q9H825 291 aaKnown RBP7.88□□□□□ -1.15
SPG11-214ENST00000558989 GLS2Q9UI32 602 aa7.88□□□□□ -1.15
SPG11-214ENST00000558989 TRAV8-7A0A075B6U6 113 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 A0A1W2PN81 502 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 FAM172BPA6NC97 362 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 M0R1W7 72 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 SH2D1BO14796 132 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 RGS10O43665 173 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 KDM4BO94953 1096 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 IGHV4-59P01825 116 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 MT-ND2P03891 347 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 HSMCR30P0CW71 290 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 SERPINA2P20848 420 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 SAA4P35542 130 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 ZNF93P35789 620 aaPredicted RBP7.87□□□□□ -1.15
SPG11-214ENST00000558989 CHRNA7P36544 502 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 F2RL1P55085 397 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 RPS11P62280 158 aaKnown RBP eCLIP7.87□□□□□ -1.15
SPG11-214ENST00000558989 AESQ08117 197 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 Q499Y3 187 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 Q6YL49 198 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 ZNF485Q8NCK3 441 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 MYDGFQ969H8 173 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 ZNF184Q99676 751 aaPredicted RBP7.87□□□□□ -1.15
SPG11-214ENST00000558989 TMED9Q9BVK6 235 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 MMP27Q9H306 513 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 FKBP14Q9NWM8 211 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 UBE2J1Q9Y385 318 aaPredicted RBP7.87□□□□□ -1.15
SPG11-214ENST00000558989 TENM1Q9UKZ4 2725 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 LOC100506127A0A0U1RQW1 187 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 FAM181BA6NEQ2 426 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 DEGS1O15121 323 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 RAB6AP20340 208 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 BDKRB2P30411 391 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 TGFBR2P37173 567 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 MAP2K4P45985 399 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 CDKN1BP46527 198 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 OR3A1P47881 315 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 RPL15P61313 204 aaKnown RBP7.87□□□□□ -1.15
SPG11-214ENST00000558989 COTL1Q14019 142 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 PIGYQ3MUY2 71 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 Q3ZCU0 254 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 HCP5Q6MZN7 132 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 JAGN1Q8N5M9 183 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 C3orf56Q8N813 242 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 OR5D13Q8NGL4 314 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 RPS4Y2Q8TD47 263 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 S100A13Q99584 98 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 ASCL2Q99929 193 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 MND1Q9BWT6 205 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 FAM234AQ9H0X4 552 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 ZNF581Q9P0T4 197 aa7.87□□□□□ -1.15
SPG11-214ENST00000558989 TRBV5-5A0A0J9YX44 114 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 A0A1W2PP11 408 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 H0YJX3 145 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 WRBO00258 174 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 CRYBA1P05813 215 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 RNASE1P07998 156 aaKnown RBP7.86□□□□□ -1.15
SPG11-214ENST00000558989 GLIPR1P48060 266 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 UBE2E1P51965 193 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 TAS2R43P59537 309 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 MRPS15P82914 257 aaKnown RBP7.86□□□□□ -1.15
SPG11-214ENST00000558989 DYNC1I2Q13409 638 aaKnown RBP7.86□□□□□ -1.15
SPG11-214ENST00000558989 ZNF146Q15072 292 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 LY6EQ16553 131 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 AANATQ16613 207 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 YIF1BQ5BJH7 314 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 SPIN3Q5JUX0 258 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 FAM27D1Q5T7N8 215 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 NCR3LG1Q68D85 454 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 BAIAP2L2Q6UXY1 529 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 TCF23Q7RTU1 214 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 LHFPL4Q7Z7J7 247 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 C11orf42Q8N5U0 333 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 DPF1Q92782 380 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 TMEM203Q969S6 136 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 NOX4Q9NPH5 578 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 TMEM138Q9NPI0 162 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 CKLFQ9UBR5 152 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 SLC45A2Q9UMX9 530 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 TPRKBQ9Y3C4 175 aa7.86□□□□□ -1.15
SPG11-214ENST00000558989 TRAV39A0A0B4J263 110 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 A0A0G2JK05 382 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 hADV38S2A0JD32 116 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 TMEM89A2RUT3 159 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms