RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 RFESDQ8TAC1 157 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 UBALD1Q8TB05 177 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 ZNF596Q8TC21 504 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 TNFAIP8L1Q8WVP5 186 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 TRUB1Q8WWH5 349 aaKnown RBP5.85□□□□□ -1.47
SPG11-213ENST00000558988 TOMM40LQ969M1 308 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 COQ2Q96H96 371 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 OR4F4Q96R69 305 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 C9orf16Q9BUW7 83 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 AKIP1Q9NQ31 210 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 TAS2R4Q9NYW5 299 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 DPM3Q9P2X0 92 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 KIF25Q9UIL4 384 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 NOTCH1P46531 2555 aa5.85□□□□□ -1.47
SPG11-213ENST00000558988 A0A1W2PPE3 182 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 TCRBV4S1A1TA0A5B7 111 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 TMEM212A6NML5 194 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 LEUTXA8MZ59 168 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 J3QRE1 110 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 GABRPO00591 440 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 PIN1P1O15428 100 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 CCDC159P0C7I6 412 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 IGLL1P15814 213 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 RAB3AP20336 220 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 ERP29P30040 261 aaKnown RBP5.84□□□□□ -1.47
SPG11-213ENST00000558988 CEACAM3P40198 252 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 MNDAP41218 407 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 CCR9P51686 369 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 PRRX1P54821 245 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 SCAND1P57086 179 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 EMX1Q04741 257 aaPredicted RBP5.84□□□□□ -1.47
SPG11-213ENST00000558988 LRRC36Q1X8D7 754 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 HLA-DRB5Q30154 266 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 TPTE2P1Q5T6R2 138 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 XAF1Q6GPH4 301 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 ZFP1Q6P2D0 407 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 Q6P435 159 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 C10orf99Q6UWK7 81 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 HEPN1Q6WQI6 88 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 SERPINA12Q8IW75 414 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 Q8N2B8 174 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 OR52I1Q8NGK6 324 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 MRGPRDQ8TDS7 321 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 NEK7Q8TDX7 302 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 RPEQ96AT9 228 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 ORAI1Q96D31 301 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 AKR1E2Q96JD6 320 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 Q96MT0 163 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 SLC29A1Q99808 456 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 CALYQ9NYX4 217 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 ZNF581Q9P0T4 197 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 ING4Q9UNL4 249 aa5.84□□□□□ -1.47
SPG11-213ENST00000558988 EXOGQ9Y2C4 368 aaKnown RBP5.84□□□□□ -1.47
SPG11-213ENST00000558988 ANK2Q01484 3957 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 PNMA8CA0A1B0GUJ8 204 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 ZNF729A6NN14 1252 aaPredicted RBP5.83□□□□□ -1.48
SPG11-213ENST00000558988 BUB1B-PAK6H3BSN5 160 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 XPNPEP2O43895 674 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 MPZL2O60487 215 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 OR7C1O76099 320 aaPredicted RBP5.83□□□□□ -1.48
SPG11-213ENST00000558988 CDRT1O95170 752 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CLIC3O95833 236 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CD2P06729 351 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 SNRNP70P08621 437 aaKnown RBP5.83□□□□□ -1.48
SPG11-213ENST00000558988 GABRB1P18505 474 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 SERPINA2P20848 420 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 REG1BP48304 166 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 MTNR1BP49286 362 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 DYNLT3P51808 116 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 ZP1P60852 638 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 BDH1Q02338 343 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CD69Q07108 199 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CDK5R1Q15078 307 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 C17orf58Q2M2W7 97 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 SLC25A30Q5SVS4 291 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 ATAD3CQ5T2N8 411 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 DDI2Q5TDH0 399 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 OR2G6Q5TZ20 316 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 RTN4RL2Q86UN3 420 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 SAXO1Q8IYX7 474 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 SYS1Q8N2H4 156 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 DRAM1Q8N682 238 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 ZFP41Q8N8Y5 198 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CHST4Q8NCG5 386 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 ZNF555Q8NEP9 628 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 OR4X2Q8NGF9 303 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 OR13A1Q8NGR1 328 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 OR13C5Q8NGS8 318 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 OR56B4Q8NH76 319 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CNIH3Q8TBE1 160 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 PLPPR1Q8TBJ4 325 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CCDC107Q8WV48 283 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CYGBQ8WWM9 190 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 RGP1Q92546 391 aaPredicted RBP5.83□□□□□ -1.48
SPG11-213ENST00000558988 MYDGFQ969H8 173 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 PHF21AQ96BD5 680 aa5.83□□□□□ -1.48
SPG11-213ENST00000558988 CPNE2Q96FN4 548 aaPredicted RBP5.83□□□□□ -1.48
SPG11-213ENST00000558988 MYCBPQ99417 103 aaPredicted RBP5.83□□□□□ -1.48
SPG11-213ENST00000558988 S100A13Q99584 98 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms