RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 HIST1H2AAQ96QV6 131 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
LRRC28-211ENST00000558890 FAAP24Q9BTP7 215 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 LIME1Q9H400 295 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 RASL12Q9NYN1 266 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 ST3GAL6Q9Y274 331 aa6.52□□□□□ -1.37
LRRC28-211ENST00000558890 CSPG4Q6UVK1 2322 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 ZANQ9Y493 2812 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 IGKV1-27A0A075B6S5 117 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 TRBV6-7A0A0A0MS04 114 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 IGKV1-12A0A0C4DH73 117 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 RNF222A6NCQ9 220 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 CRYM-AS1A6NIL9 109 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 ANKRD30BLA7E2S9 258 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 IQCF6A8MYZ5 107 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 SHISA9B4DS77 424 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 GEMIN2O14893 280 aaKnown RBP6.51□□□□□ -1.37
LRRC28-211ENST00000558890 PLAUP00749 431 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 CST4P01036 141 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 KNG1P01042 644 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 IGKV1D-12P01611 117 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 CELA3BP08861 270 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 FUT3P21217 361 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 GLRA1P23415 457 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 APOBEC3AP31941 199 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-211ENST00000558890 WNT5AP41221 380 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 S100A10P60903 97 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 PPP1CBP62140 327 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 PRDX4Q13162 271 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 ZNF718Q3SXZ3 478 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 ZNF672Q499Z4 452 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-211ENST00000558890 SLC22A25Q6T423 547 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 C20orf204Q6ZNR8 217 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 SLC25A26Q70HW3 274 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 MYPOPQ86VE0 399 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-211ENST00000558890 MKXQ8IYA7 352 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 POC1AQ8NBT0 407 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 OR10AD1Q8NGE0 317 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 STOML3Q8TAV4 291 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 TMEM171Q8WVE6 324 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 NRGNQ92686 78 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 TOMM40LQ969M1 308 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 PIK3IP1Q96FE7 263 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 PLPPR2Q96GM1 343 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 DIRC2Q96SL1 478 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 SULT4A1Q9BR01 284 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 HDHD3Q9BSH5 251 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-211ENST00000558890 ZC4H2Q9NQZ6 224 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 ZFP57Q9NU63 452 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 DNAJB11Q9UBS4 358 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
LRRC28-211ENST00000558890 KCNIP3Q9Y2W7 256 aa6.51□□□□□ -1.37
LRRC28-211ENST00000558890 MED13LQ71F56 2210 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 IGKV1D-8A0A087WSZ0 117 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 A0A1W2PR80 420 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 PQLC2LA1A4F0 135 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 OR5B21A6NL26 309 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 B9A039 149 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 ATP6V1G2-DDX39BF2Z307 99 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 TRAPPC2LH3BP13 241 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 HS3ST1O14792 307 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 ADAP1O75689 374 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 OR7C1O76099 320 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SFTPBP07988 381 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 HOXB5P09067 269 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 LYL1P12980 280 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 RPS2P15880 293 aaKnown RBP6.5□□□□□ -1.37
LRRC28-211ENST00000558890 M6PRP20645 277 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 GCH1P30793 250 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 FGF12P61328 243 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SUPT4H1P63272 117 aaKnown RBP6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SRPXP78539 464 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 MZT1Q08AG7 82 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 TESK1Q15569 626 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 MPV17LQ2QL34 196 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 ANKRD55Q3KP44 614 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 CEACAM21Q3KPI0 293 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 PIGYQ3MUY2 71 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 PAN3Q58A45 887 aaKnown RBP6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SIGIRRQ6IA17 410 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 EIF5AL1Q6IS14 154 aaKnown RBP6.5□□□□□ -1.37
LRRC28-211ENST00000558890 LINC00596Q86U02 117 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 DTX2Q86UW9 622 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SLC38A6Q8IZM9 456 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 FAM185AQ8N0U4 392 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SPERTQ8NA61 448 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 BVESQ8NE79 360 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 OR1J1Q8NGS3 322 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 OR1S1Q8NH92 325 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 C17orf50Q8WW18 174 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 MRPL24Q96A35 216 aaKnown RBP6.5□□□□□ -1.37
LRRC28-211ENST00000558890 AQP10Q96PS8 301 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SYT3Q9BQG1 590 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SUCNR1Q9BXA5 334 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 DNTTIP1Q9H147 329 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 PLK3Q9H4B4 646 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 NAA60Q9H7X0 242 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 SPACA1Q9HBV2 294 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 DECR2Q9NUI1 292 aa6.5□□□□□ -1.37
LRRC28-211ENST00000558890 STARD10Q9Y365 291 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms