RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ASB17Q8WXJ9 295 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 ATP6V1G3Q96LB4 118 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 C16orf92Q96LL3 132 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 LRGUKQ96M69 825 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 THAP7Q9BT49 309 aaPredicted RBP5.15□□□□□ -1.59
LRRC28-207ENST00000558500 TTTY10Q9BZA0 68 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 CHST5Q9GZS9 411 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 COMMD4Q9H0A8 199 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 ZCCHC4Q9H5U6 513 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 EFCAB1Q9HAE3 211 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 MRM2Q9UI43 246 aaKnown RBP5.15□□□□□ -1.59
LRRC28-207ENST00000558500 OR52A1Q9UKL2 312 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 IKZF2Q9UKS7 526 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 COPS3Q9UNS2 423 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 R4GMQ9 66 aa5.15□□□□□ -1.59
LRRC28-207ENST00000558500 DSCAML1Q8TD84 2053 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 MEIKINA0A087WXM9 373 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 IGKV1-12A0A0C4DH73 117 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 CXorf65A6NEN9 183 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 NUPR2A6NF83 97 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 H0Y980 276 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 H3BN98 237 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 SLC33A1O00400 549 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 ARPC1BO15143 372 aaKnown RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 ATP6V0E1O15342 81 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 RGS11O94810 467 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 KDM4BO94953 1096 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 SERPINA3P01011 423 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 IGKV1D-12P01611 117 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 HSPB1P04792 205 aaKnown RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 MRPL3P09001 348 aaKnown RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 SLC2A2P11168 524 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 C21orf33P30042 268 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 MTCP1P56278 107 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 SCN1BQ07699 218 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 PPP1R8Q12972 351 aaKnown RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 PMS2P11Q13670 270 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 GINS1Q14691 196 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 MICAQ29983 383 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 ZNF322Q6U7Q0 402 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 CD300LDQ6UXZ3 194 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 PLEKHG7Q6ZR37 379 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 GTSCR1Q86UQ5 136 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 YIPF7Q8N8F6 280 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 DNAAF1Q8NEP3 725 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 OR51T1Q8NGJ9 327 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 RTN4IP1Q8WWV3 396 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 TMEM106AQ96A25 262 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 FLYWCH2Q96CP2 140 aaKnown RBP5.14□□□□□ -1.59
LRRC28-207ENST00000558500 MBOAT4Q96T53 435 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 APOL4Q9BPW4 351 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 NIPSNAP1Q9BPW8 284 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 NCOR1P1Q9H4R4 102 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 SPAG4Q9NPE6 437 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 PARP11Q9NR21 331 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 FAM53CQ9NYF3 392 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 KIF25Q9UIL4 384 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 MAGEL2Q9UJ55 1249 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 SNX5Q9Y5X3 404 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 TMEM14AQ9Y6G1 99 aa5.14□□□□□ -1.59
LRRC28-207ENST00000558500 DYNC1H1Q14204 4646 aaKnown RBP5.13□□□□□ -1.59
LRRC28-207ENST00000558500 IGHV7-81A0A0B4J1V7 117 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 IGKV1-9A0A0C4DH69 117 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 DEGS1O15121 323 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 ARPC2O15144 300 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 MAGEB4O15481 346 aaPredicted RBP5.13□□□□□ -1.59
LRRC28-207ENST00000558500 SYT7O43581 403 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 SOX15O60248 233 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 IGHV3-11P01762 117 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 HLA-DRB1P01911 266 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 HMGN1P05114 100 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 BLVRBP30043 206 aaPredicted RBP5.13□□□□□ -1.59
LRRC28-207ENST00000558500 SSTR5P35346 364 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 RAB40BQ12829 278 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 PDZK1IP1Q13113 114 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 APOFQ13790 326 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 MMDQ15546 238 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 ODF4Q2M2E3 257 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 C19orf54Q5BKX5 351 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 CGB2Q6NT52 195 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 CEMP1Q6PRD7 247 aaPredicted RBP5.13□□□□□ -1.59
LRRC28-207ENST00000558500 LINC00311Q8N616 119 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 MRGPRDQ8TDS7 321 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 CASTOR1Q8WTX7 329 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 PP6455Q8WZ26 134 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 NSMCE2Q96MF7 247 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 SPACA5Q96QH8 159 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 PLEKHA3Q9HB20 300 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 FAT2Q9NYQ8 4349 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 TNCP24821 2201 aa5.13□□□□□ -1.59
LRRC28-207ENST00000558500 CCDC182A6NF36 153 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 TXNL1O43396 289 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 CNIH1O95406 144 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 MED14OSP0DP75 135 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 PRKACBP22694 351 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 IL3RAP26951 378 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 VHLP40337 213 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 MAGEA2P43356 314 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 CRIP2P52943 208 aaPredicted RBP5.12□□□□□ -1.59
LRRC28-207ENST00000558500 CXCR4P61073 352 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms