RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ERVFRD-1P60508 538 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 TWIST1Q15672 202 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 HILPDAQ9Y5L2 63 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 LAMA4Q16363 1823 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 TRAV17A0A0B4J275 112 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 CHAC2Q8WUX2 184 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 R3HDM4Q96D70 268 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 SLC25A1P53007 311 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 WDR25Q64LD2 544 aaPredicted RBP12.28□□□□□ -0.44
SPG11-210ENST00000558319 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 TMEM108Q6UXF1 575 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 WDFY1Q8IWB7 410 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 ALG14Q96F25 216 aa12.28□□□□□ -0.44
SPG11-210ENST00000558319 A0A1W2PN81 502 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 M0R296 226 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 ISLRO14498 428 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 CD74P04233 296 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 FAM3BP58499 235 aaPredicted RBP12.27□□□□□ -0.44
SPG11-210ENST00000558319 GGTLC2Q14390 218 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 RBPMS2Q6ZRY4 209 aaKnown RBP12.27□□□□□ -0.44
SPG11-210ENST00000558319 CYB561D1Q8N8Q1 229 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 TINAGQ9UJW2 476 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 TGIF2-C20orf24A0A0A6YYL0 155 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 EIF3GO75821 320 aaKnown RBP eCLIP12.27□□□□□ -0.44
SPG11-210ENST00000558319 IP6K3Q96PC2 410 aa12.27□□□□□ -0.44
SPG11-210ENST00000558319 TMEM127O75204 238 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 ZNF324O75467 553 aaPredicted RBP12.27□□□□□ -0.45
SPG11-210ENST00000558319 RELBQ01201 579 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 TPRX1Q8N7U7 411 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 RPS4Y2Q8TD47 263 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 PDCD6O75340 191 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 CXCL2P19875 107 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 ST6GALNAC3Q8NDV1 305 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 OR1L1Q8NH94 360 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 ANKRD36CQ5JPF3 1778 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 CCL21O00585 134 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 ZCCHC14Q8WYQ9 949 aaKnown RBP12.27□□□□□ -0.45
SPG11-210ENST00000558319 RAB1BQ9H0U4 201 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 STARD10Q9Y365 291 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 TOPAZ1Q8N9V7 1692 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 TOGARAM1Q9Y4F4 1720 aa12.27□□□□□ -0.45
SPG11-210ENST00000558319 TRIP11Q15643 1979 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 CDC42EP2O14613 210 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 PLA2G10O15496 165 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 PDE6DO43924 150 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 CD3EP07766 207 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 TMEM174Q8WUU8 243 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 MRGPRFQ96AM1 343 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 KIF13AQ9H1H9 1805 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 KLK2P20151 261 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 MSRB3Q8IXL7 192 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 OR8B12Q8NGG6 310 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 MRPL30Q8TCC3 161 aaKnown RBP12.26□□□□□ -0.45
SPG11-210ENST00000558319 ZNF488Q96MN9 340 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 ASCL3Q9NQ33 180 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 CCL28Q9NRJ3 127 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 FRRS1LQ9P0K9 344 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 CDIPTO14735 213 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 IGLV3-27P01718 113 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 PGA4P0DJD7 388 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 IGHV1OR21-1A0A087WYE8 117 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 DDTP30046 118 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 OR4X1Q8NH49 305 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 PTX4Q96A99 478 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 RASL11BQ9BPW5 248 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 CTSDP07339 412 aaPredicted RBP12.26□□□□□ -0.45
SPG11-210ENST00000558319 BRS3P32247 399 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 GPR3P46089 330 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 PRICKLE4Q2TBC4 344 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 JMJD6Q6NYC1 403 aaPredicted RBP12.26□□□□□ -0.45
SPG11-210ENST00000558319 SGMS2Q8NHU3 365 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 ADAMTS17Q8TE56 1095 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 UCN2Q96RP3 112 aa12.26□□□□□ -0.45
SPG11-210ENST00000558319 NUDT3O95989 172 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 LGALS7P47929 136 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 FAM53BQ14153 422 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 SLC25A42Q86VD7 318 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 TBX21Q9UL17 535 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 MYO7AQ13402 2215 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 NT5CQ8TCD5 201 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 DDA1Q9BW61 102 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 DNAJB12Q9NXW2 375 aaKnown RBP12.25□□□□□ -0.45
SPG11-210ENST00000558319 MRM2Q9UI43 246 aaKnown RBP12.25□□□□□ -0.45
SPG11-210ENST00000558319 KIR2DS2P43631 304 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 SSPNQ14714 243 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 VSIG4Q9Y279 399 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 CELA2AP08217 269 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 GALP22466 123 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 MRGPRGQ86SM5 289 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 CALHM1Q8IU99 346 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 Q8IYB0 196 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 PARP11Q9NR21 331 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 PRRX1P54821 245 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
SPG11-210ENST00000558319 ZNF770Q6IQ21 691 aaPredicted RBP12.25□□□□□ -0.45
SPG11-210ENST00000558319 B4E171 279 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms