RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ATAD3CQ5T2N8 411 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 DDI2Q5TDH0 399 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 UNQ9370/PRO34162Q6UXP9 181 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 SLC35E3Q7Z769 313 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 ZNF329Q86UD4 541 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 PQLC1Q8N2U9 271 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 C5orf56Q8N8D9 126 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 PLPPR1Q8TBJ4 325 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 NEK7Q8TDX7 302 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 ARL11Q969Q4 196 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 RDH12Q96NR8 316 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 SLC29A1Q99808 456 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 SPACA1Q9HBV2 294 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 S100A14Q9HCY8 104 aa10.79□□□□□ -0.68
SNRPA1-204ENST00000558020 SDCBPO00560 298 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 HSD17B6O14756 317 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 ORC5O43913 435 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 IGHG2P01859 326 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 SSTR5P35346 364 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 ETV1P50549 477 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 GP2P55259 537 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 RPL23AP62750 156 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 ZNF816Q0VGE8 651 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 RIPK1Q13546 671 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 C10orf99Q6UWK7 81 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 LINC00482Q8N8I6 264 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 C8orf31Q8N9H6 132 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 OR2T10Q8NGZ9 312 aa10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 MRPS24Q96EL2 167 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-204ENST00000558020 TRAV39A0A0B4J263 110 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 IGHV1-3A0A0C4DH29 117 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 AP4M1O00189 453 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 GEMIN2O14893 280 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 OGG1O15527 345 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 SPINT2O43291 252 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 BAG2O95816 211 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 SERPINA2P20848 420 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 MYCNOSP40205 109 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 THBS3P49746 956 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 EBI3Q14213 229 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 TMEM30BQ3MIR4 351 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 SLC22A6Q4U2R8 563 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 TEX38Q6PEX7 206 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 OR2W3Q7Z3T1 314 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 TGIF2LXQ8IUE1 241 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 MRPL41Q8IXM3 137 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 LINC00311Q8N616 119 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 RGP1Q92546 391 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 GHSRQ92847 366 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 SMIM19Q96E16 107 aa10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 ZNF184Q99676 751 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 SMPD3Q9NY59 655 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 EXOSC1Q9Y3B2 195 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-204ENST00000558020 A0A1W2PPE3 182 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 K7EIL1 84 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 AIPO00170 330 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 TXNL1O43396 289 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 WBP4O75554 376 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 MT-ND4P03905 459 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 CD1BP29016 333 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 EGFEM1PQ0D2K5 195 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 DIAPH2-AS1Q14236 149 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 SMN1Q16637 294 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 Q3ZCU0 254 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 YIF1BQ5BJH7 314 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 VAX1Q5SQQ9 334 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 OR2G6Q5TZ20 316 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 ZNF695Q8IW36 515 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 CCDC107Q8WV48 283 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 APH1BQ8WW43 257 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 TMEM80Q96HE8 168 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 EAF1Q96JC9 268 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 NOL4LQ96MY1 436 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 RASL11BQ9BPW5 248 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 TRAPPC2LQ9UL33 140 aa10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 DIMT1Q9UNQ2 313 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-204ENST00000558020 RRP9O43818 475 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 GPX5O75715 221 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 MOSP00540 346 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 REG1BP48304 166 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 PNLIPRP3Q17RR3 467 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 Q499Y3 187 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 C6orf183Q5T699 404 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 TTC23Q5W5X9 447 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 XAF1Q6GPH4 301 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 TRAT1Q6PIZ9 186 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 CDH26Q8IXH8 852 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 IZUMO1Q8IYV9 350 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 STPG2Q8N412 459 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 SETD9Q8NE22 299 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 KLHL30-AS1Q8NEE0 82 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 RTN4IP1Q8WWV3 396 aaPredicted RBP10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 ABCG5Q9H222 651 aa10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNRPA1-204ENST00000558020 C8orf4Q9NR00 106 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms