RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PRIMA1Q86XR5 153 aa20.85■□□□□ 0.93
SMAD6-202ENST00000557916 PIP4P2Q8N4L2 257 aa20.85■□□□□ 0.93
SMAD6-202ENST00000557916 OR10R2Q8NGX6 335 aa20.85■□□□□ 0.93
SMAD6-202ENST00000557916 SUCNR1Q9BXA5 334 aa20.85■□□□□ 0.93
SMAD6-202ENST00000557916 TMEM133Q9H2Q1 129 aa20.85■□□□□ 0.93
SMAD6-202ENST00000557916 ETV7Q9Y603 341 aa20.85■□□□□ 0.93
SMAD6-202ENST00000557916 CUBNO60494 3623 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 GDNFP39905 211 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 PLAC9Q5JTB6 97 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 OR52W1Q6IF63 320 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 USP43Q70EL4 1123 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 OR5H6Q8NGV6 325 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 RFESDQ8TAC1 157 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 MRPL30Q8TCC3 161 aaKnown RBP20.84■□□□□ 0.93
SMAD6-202ENST00000557916 ZNF418Q8TF45 676 aaPredicted RBP20.84■□□□□ 0.93
SMAD6-202ENST00000557916 RAB3CQ96E17 227 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 LINC00574Q9H8X3 128 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 ABRACLQ9P1F3 81 aa20.84■□□□□ 0.93
SMAD6-202ENST00000557916 RAB27BO00194 218 aa20.83■□□□□ 0.93
SMAD6-202ENST00000557916 SSTR5P35346 364 aa20.83■□□□□ 0.93
SMAD6-202ENST00000557916 TUSC1Q2TAM9 212 aa20.83■□□□□ 0.93
SMAD6-202ENST00000557916 SIGLECL1Q8N7X8 197 aa20.83■□□□□ 0.93
SMAD6-202ENST00000557916 DCSTAMPQ9H295 470 aa20.83■□□□□ 0.93
SMAD6-202ENST00000557916 RHBDL2Q9NX52 303 aa20.83■□□□□ 0.93
SMAD6-202ENST00000557916 AK3Q9UIJ7 227 aa20.83■□□□□ 0.93
SMAD6-202ENST00000557916 MEIOCA2RUB1 952 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 NPIPB11E5RHQ5 1161 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 ORC5O43913 435 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 C6orf183Q5T699 404 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 NDNFQ8TB73 568 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 RAB2BQ8WUD1 216 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 ARL11Q969Q4 196 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 ZNF48Q96MX3 618 aaPredicted RBP20.82■□□□□ 0.92
SMAD6-202ENST00000557916 IDI2-AS1Q9NZ38 188 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 SPATA2Q9UM82 520 aa20.82■□□□□ 0.92
SMAD6-202ENST00000557916 A0A0U1RQK1 487 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 C15orf65H3BRN8 121 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 TCF21O43680 179 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 RCC1P18754 421 aaPredicted RBP20.81■□□□□ 0.92
SMAD6-202ENST00000557916 SAA4P35542 130 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 TMBIM6P55061 237 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 DEFB112Q30KQ8 113 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 MIDNQ504T8 468 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 BAIAP2L2Q6UXY1 529 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 RBMS3Q6XE24 437 aaKnown RBP20.81■□□□□ 0.92
SMAD6-202ENST00000557916 OR11H6Q8NGC7 330 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 KIRREL1Q96J84 757 aa20.81■□□□□ 0.92
SMAD6-202ENST00000557916 RIMS4Q9H426 269 aaPredicted RBP20.81■□□□□ 0.92
SMAD6-202ENST00000557916 CHMP1AQ9HD42 196 aaPredicted RBP20.81■□□□□ 0.92
SMAD6-202ENST00000557916 IGHV2-26A0A0B4J1V2 119 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 NAPSAO96009 420 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 NFYBP25208 207 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 LTC4SQ16873 150 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 TRAT1Q6PIZ9 186 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 OR10A7Q8NGE5 316 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 CLEC7AQ9BXN2 247 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 MBNL3Q9NUK0 354 aaKnown RBP20.8■□□□□ 0.92
SMAD6-202ENST00000557916 FAM96BQ9Y3D0 163 aa20.8■□□□□ 0.92
SMAD6-202ENST00000557916 A0A075B6Q4 140 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 MDFIC2A0A1B0GVS7 189 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 FAM172BPA6NC97 362 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 C12orf77C9JDV5 145 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 SCGNO76038 276 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 ARG1P05089 322 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 HIST1H1DP16402 221 aaKnown RBP20.79■□□□□ 0.92
SMAD6-202ENST00000557916 RORCP51449 518 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 LGALS4P56470 323 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 DYNC1I2Q13409 638 aaKnown RBP20.79■□□□□ 0.92
SMAD6-202ENST00000557916 OLFML2AQ68BL7 652 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 ABHD12Q8N2K0 398 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 UBALD1Q8TB05 177 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 KCTD12Q96CX2 325 aaKnown RBP20.79■□□□□ 0.92
SMAD6-202ENST00000557916 SLC25A38Q96DW6 304 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 BCL7BQ9BQE9 202 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 KCNIP1Q9NZI2 227 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 KCNK7Q9Y2U2 307 aa20.79■□□□□ 0.92
SMAD6-202ENST00000557916 ODF3BA8MYP8 253 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 SPINT2O43291 252 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 GNB3P16520 340 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 ZNF626Q68DY1 528 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 ZDHHC16Q969W1 377 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 CMSS1Q9BQ75 279 aaKnown RBP20.78■□□□□ 0.92
SMAD6-202ENST00000557916 HDHD3Q9BSH5 251 aaPredicted RBP20.78■□□□□ 0.92
SMAD6-202ENST00000557916 ZMAT3Q9HA38 289 aaKnown RBP20.78■□□□□ 0.92
SMAD6-202ENST00000557916 TAF9BQ9HBM6 251 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 RAB9BQ9NP90 201 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 C12orf4Q9NQ89 552 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 A0A087X0M5 115 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 A0A0A6YYJ9 748 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 A0A1B0GX30 115 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 MFNGO00587 321 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 NOL3O60936 208 aaKnown RBP20.78■□□□□ 0.92
SMAD6-202ENST00000557916 HILS1P60008 231 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 MRPS15P82914 257 aaKnown RBP20.78■□□□□ 0.92
SMAD6-202ENST00000557916 SPCS2Q15005 226 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 ZNF554Q86TJ5 538 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 PRR18Q8N4B5 295 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 SETD6Q8TBK2 473 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 PHF21AQ96BD5 680 aa20.78■□□□□ 0.92
SMAD6-202ENST00000557916 PRDM13Q9H4Q3 707 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms