RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ARG1P05089 322 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 CGB3P0DN86 165 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 CGB7P0DN87 165 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 NFYBP25208 207 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 RPS19P39019 145 aaKnown RBP11.68□□□□□ -0.54
USP3-205ENST00000557884 BAMBIQ13145 260 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 DYNC1I2Q13409 638 aaKnown RBP11.68□□□□□ -0.54
USP3-205ENST00000557884 MOGAT2Q3SYC2 334 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 UTF1Q5T230 341 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 OR56B1Q8NGI3 324 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
USP3-205ENST00000557884 TMEM133Q9H2Q1 129 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 ESM1Q9NQ30 184 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 FAM96BQ9Y3D0 163 aa11.68□□□□□ -0.54
USP3-205ENST00000557884 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 FOXI3A8MTJ6 420 aaPredicted RBP11.67□□□□□ -0.54
USP3-205ENST00000557884 IGHV3-7P01780 117 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 RCC1P18754 421 aaPredicted RBP11.67□□□□□ -0.54
USP3-205ENST00000557884 RAB6AP20340 208 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 PAX6P26367 422 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 LGALS4P56470 323 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 TMEM50BP56557 158 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 HILS1P60008 231 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 TUSC1Q2TAM9 212 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 Q6ZTK2 550 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 USP43Q70EL4 1123 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 ANKRD13BQ86YJ7 626 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 ARL11Q969Q4 196 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 HDHD3Q9BSH5 251 aaPredicted RBP11.67□□□□□ -0.54
USP3-205ENST00000557884 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 PECRQ9BY49 303 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 ZNF286AQ9HBT8 521 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 CHMP1AQ9HD42 196 aaPredicted RBP11.67□□□□□ -0.54
USP3-205ENST00000557884 TNFRSF19Q9NS68 423 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 AK3Q9UIJ7 227 aa11.67□□□□□ -0.54
USP3-205ENST00000557884 A0A075B6Q4 140 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 DNAJC9-AS1A6NH13 148 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 ODF3BA8MYP8 253 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 C12orf77C9JDV5 145 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 C15orf65H3BRN8 121 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 CA11O75493 328 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 GABARAPO95166 117 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 CTF1Q16619 201 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 MIDNQ504T8 468 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 PLAC9Q5JTB6 97 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 C6orf183Q5T699 404 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 OLFML2AQ68BL7 652 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 OR52W1Q6IF63 320 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 C5orf24Q7Z6I8 188 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 CLVS1Q8IUQ0 354 aaPredicted RBP11.66□□□□□ -0.54
USP3-205ENST00000557884 GAPTQ8N292 157 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 ABHD12Q8N2K0 398 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 PRR18Q8N4B5 295 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 OR10R2Q8NGX6 335 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 SETD6Q8TBK2 473 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 RAB3CQ96E17 227 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 KIRREL1Q96J84 757 aa11.66□□□□□ -0.54
USP3-205ENST00000557884 METTL21EPA6NDL7 271 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 NPIPB11E5RHQ5 1161 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
USP3-205ENST00000557884 MELTFP08582 738 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 FBP1P09467 338 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 GNB3P16520 340 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 GZMHP20718 246 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 RPL5P46777 297 aaKnown RBP11.65□□□□□ -0.54
USP3-205ENST00000557884 ZNF626Q68DY1 528 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 FAM53AQ6NSI3 398 aaPredicted RBP11.65□□□□□ -0.54
USP3-205ENST00000557884 OR1L1Q8NH94 360 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 NDNFQ8TB73 568 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 PTX4Q96A99 478 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 AJUBAQ96IF1 538 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 JMJD8Q96S16 334 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 LINC00574Q9H8X3 128 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 ZMAT3Q9HA38 289 aaKnown RBP11.65□□□□□ -0.54
USP3-205ENST00000557884 RHBDL2Q9NX52 303 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 ZNRD1Q9P1U0 126 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 SCOCQ9UIL1 159 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 HSF4Q9ULV5 492 aa11.65□□□□□ -0.54
USP3-205ENST00000557884 A0A0A6YYJ9 748 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 RAB27BO00194 218 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 SPINT2O43291 252 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 ORC5O43913 435 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 IGHV4-59P01825 116 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 HBZP02008 142 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 GNG10P50151 68 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 SLC9A3R2Q15599 337 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 FAM189A2Q15884 450 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 PLA1AQ53H76 456 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 LDLRAD2Q5SZI1 272 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 Q6YL49 198 aa11.64□□□□□ -0.55
USP3-205ENST00000557884 Q6ZPA2 131 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms