RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 DDX60Q8IY21 1712 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TGIF2-C20orf24A0A0A6YYL0 155 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 IGHV2OR16-5A0A0B4J2B6 119 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 LOC100131303A0A0U1RQF7 123 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CENPVL3A0A0U1RRI6 287 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SMIM28A0A1B0GU29 152 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PSMB11A5LHX3 300 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR5H1A6NKK0 313 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 A8MU10 97 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SAP18O00422 153 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RGS16O15492 202 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 FCN3O75636 299 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR2J3O76001 311 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TYMSP04818 313 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ALDOBP05062 364 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 NMBP08949 121 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR4Q2P0C623 313 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GZMBP10144 247 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 IGLL1P15814 213 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ABOP16442 354 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TAC1P20366 129 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RBM34P42696 430 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GPR6P46095 362 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CKS1BP61024 79 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OSTNP61366 133 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 DYNLL1P63167 89 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GNA12Q03113 381 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 FABP9Q0Z7S8 132 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PJVKQ0ZLH3 352 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SLC10A1Q14973 349 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 JOSD1Q15040 202 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TBC1D28Q2M2D7 210 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM97Q5BJF2 176 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 C6orf52Q5T4I8 152 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 C1orf194Q5T5A4 169 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 AVPI1Q5T686 147 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SFXN4Q6P4A7 337 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 DNM1P46Q6ZS02 220 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 C20orf196Q8IYI0 205 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SMIM20Q8N5G0 67 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF557Q8N988 423 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 NOXO1Q8NFA2 376 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR4D9Q8NGE8 314 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR8D4Q8NGM9 314 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR2T4Q8NH00 348 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR1S1Q8NH92 325 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 UCN3Q969E3 161 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ROPN1LQ96C74 230 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 KLF6Q99612 283 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 AIF1LQ9BQI0 150 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TAPBPLQ9BX59 468 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CDCA4Q9BXL8 241 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SLIRPQ9GZT3 109 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MFSD1Q9H3U5 465 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 DHX35Q9H5Z1 703 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 REEP4Q9H6H4 257 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CWH43Q9H720 699 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A37Q9NYZ2 338 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RIMS3Q9UJD0 308 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 MEMO1Q9Y316 297 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 FLVCR1Q9Y5Y0 555 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 EFCAB5A4FU69 1503 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RGPD8O14715 1765 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RGPD2P0DJD1 1756 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 RGPD5Q99666 1765 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PIK3C2AO00443 1686 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TOPAZ1Q8N9V7 1692 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 COL5A3P25940 1745 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RPRD2Q5VT52 1461 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 LAMB2P55268 1798 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TRAV9-2A0A087WT02 112 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SPAARA0A1B0GVQ0 90 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1B0GX51 115 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TRAPPC13A5PLN9 417 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 GJE1A6NN92 205 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 KRTAP4-16G5E9R7 235 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 LY6LH3BQJ8 138 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FAAHO00519 579 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ERI3O43414 337 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 EDF1O60869 148 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 SPAG7O75391 227 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 FOXH1O75593 365 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF682O95780 498 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 LALBAP00709 142 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CFDP00746 253 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NRASP01111 189 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 IGHV3-48P01763 117 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ISG15P05161 165 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 DUX4L4P0CJ87 422 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 HLA-EP13747 358 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 AZU1P20160 251 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 PSMA1P25786 263 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 CD1CP29017 333 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 NOVP48745 357 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TAS2R41P59536 307 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 RAB10P61026 200 aa1.23□□□□□ -2.21
HIF1A-212ENST00000557538 TNFAIP6P98066 277 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 ENDOGQ14249 297 aaKnown RBP1.23□□□□□ -2.21
HIF1A-212ENST00000557538 MAPK14Q16539 360 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms