RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 FAM189A2Q15884 450 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 OLFML2AQ68BL7 652 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 Q6ZPA2 131 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 Q6ZTK2 550 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 USP43Q70EL4 1123 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 ZNF565Q8N9K5 539 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 OR10R2Q8NGX6 335 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 SUCNR1Q9BXA5 334 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 DCSTAMPQ9H295 470 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 RHBDL2Q9NX52 303 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 AK3Q9UIJ7 227 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 TRAPPC2LQ9UL33 140 aa12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 NIPBLQ6KC79 2804 aaeCLIP12.11□□□□□ -0.47
VIPAS39-210ENST00000557466 A0A0U1RQK1 487 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 FAM172BPA6NC97 362 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 METTL21EPA6NDL7 271 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 NPIPB11E5RHQ5 1161 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 C15orf65H3BRN8 121 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 MFNGO00587 321 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 TMEM127O75204 238 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 SAA4P35542 130 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 SPCS2Q15005 226 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 DEFB112Q30KQ8 113 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 UTF1Q5T230 341 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 SIGLECL1Q8N7X8 197 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 OR13D1Q8NGV5 346 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 RFESDQ8TAC1 157 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 RAB2BQ8WUD1 216 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 KIRREL1Q96J84 757 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 TMEM133Q9H2Q1 129 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 LINC00574Q9H8X3 128 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 ABRACLQ9P1F3 81 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 SPATA2Q9UM82 520 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 KCNK7Q9Y2U2 307 aa12.1□□□□□ -0.47
VIPAS39-210ENST00000557466 A0A075B6Q4 140 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 IGHV2-26A0A0B4J1V2 119 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 ORC5O43913 435 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 NAPSAO96009 420 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 IFNA2P01563 188 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 HIST1H1DP16402 221 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 TMBIM6P55061 237 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 LTC4SQ16873 150 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 C6orf183Q5T699 404 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 ZNF626Q68DY1 528 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 OR52W1Q6IF63 320 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 OR11H6Q8NGC7 330 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 ARL11Q969Q4 196 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 BCL7BQ9BQE9 202 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 CHMP1AQ9HD42 196 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-210ENST00000557466 MEIOCA2RUB1 952 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 ARG1P05089 322 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 GNB3P16520 340 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 GZMHP20718 246 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 NFYBP25208 207 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 CD34P28906 385 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 MIDNQ504T8 468 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 ZNF880Q6PDB4 577 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 ISOC1Q96CN7 298 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 CMSS1Q9BQ75 279 aaKnown RBP12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 CLEC7AQ9BXN2 247 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 ZMAT3Q9HA38 289 aaKnown RBP12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 C12orf4Q9NQ89 552 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 CEPT1Q9Y6K0 416 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 SVEP1Q4LDE5 3571 aa12.08□□□□□ -0.48
VIPAS39-210ENST00000557466 A0A087X0M5 115 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 TRBV6-6A0A0A6YYG2 114 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 A0A1B0GX30 115 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 H3BMQ9 156 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 TCF21O43680 179 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 NOL3O60936 208 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 SCGNO76038 276 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 HBZP02008 142 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 RORCP51449 518 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 DYNC1I2Q13409 638 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 HMGN3Q15651 99 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 UBE2NLQ5JXB2 153 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 LDLRAD2Q5SZI1 272 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 MOB1BQ7L9L4 216 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 LHFPL4Q7Z7J7 247 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 PRR18Q8N4B5 295 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 OR10A7Q8NGE5 316 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 OR1L1Q8NH94 360 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 SETD6Q8TBK2 473 aa12.07□□□□□ -0.48
VIPAS39-210ENST00000557466 C17orf50Q8WW18 174 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms