RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 ODF3BA8MYP8 253 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 NFYBP25208 207 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 SSTR5P35346 364 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 GDNFP39905 211 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 MXD1Q05195 221 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 ZNF626Q68DY1 528 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 C6orf201Q7Z4U5 140 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 LDLRAD3Q86YD5 345 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 GAPTQ8N292 157 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 ABHD12Q8N2K0 398 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 FAM89BQ8N5H3 189 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 TMEM86BQ8N661 226 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 OR56B1Q8NGI3 324 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 DYRK2Q92630 601 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 KIRREL1Q96J84 757 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 MDFIQ99750 246 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 SULT4A1Q9BR01 284 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 MRPS26Q9BYN8 205 aaKnown RBP11.05□□□□□ -0.64
SHMT2-228ENST00000557302 LINC00574Q9H8X3 128 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 PLEKHJ1Q9NW61 149 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 IDI2-AS1Q9NZ38 188 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 ZNRD1Q9P1U0 126 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 TRAPPC2LQ9UL33 140 aa11.05□□□□□ -0.64
SHMT2-228ENST00000557302 TBL2Q9Y4P3 447 aaKnown RBP11.05□□□□□ -0.64
SHMT2-228ENST00000557302 A0A0B4J203 849 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 FAM172BPA6NC97 362 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 NPIPB11E5RHQ5 1161 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 SOCS1O15524 211 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
SHMT2-228ENST00000557302 CLEC2LP0C7M8 214 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 SLC2A2P11168 524 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-228ENST00000557302 VEGFCP49767 419 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 FAM189A2Q15884 450 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 C6orf183Q5T699 404 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 SFXN4Q6P4A7 337 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 BAIAP2L2Q6UXY1 529 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 RTN4RL2Q86UN3 420 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 BEND2Q8NDZ0 799 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 OR10A7Q8NGE5 316 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 OR4K15Q8NH41 348 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 RFESDQ8TAC1 157 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 C17orf50Q8WW18 174 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 ARL11Q969Q4 196 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 AJUBAQ96IF1 538 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 FAAP24Q9BTP7 215 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 C19orf24Q9BVV8 132 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 RAB9BQ9NP90 201 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 TNFRSF19Q9NS68 423 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 DAPK2Q9UIK4 370 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 POMT1Q9Y6A1 747 aa11.04□□□□□ -0.64
SHMT2-228ENST00000557302 A0A087X0M5 115 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 A0A1B0GX30 115 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 BTBD17A6NE02 478 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 ORC5O43913 435 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 IGHV4-59P01825 116 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 RAB6AP20340 208 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 CD34P28906 385 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 IER3P46695 156 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 EFNB2P52799 333 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 PLA2G7Q13093 441 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 LTC4SQ16873 150 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 TRAT1Q6PIZ9 186 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 LHFPL4Q7Z7J7 247 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-228ENST00000557302 ZNF596Q8TC21 504 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 MRPL30Q8TCC3 161 aaKnown RBP11.03□□□□□ -0.64
SHMT2-228ENST00000557302 PTX4Q96A99 478 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 CYYR1Q96J86 154 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 FUNDC2Q9BWH2 189 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 ZNF286AQ9HBT8 521 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 HSF4Q9ULV5 492 aa11.03□□□□□ -0.64
SHMT2-228ENST00000557302 METTL21EPA6NDL7 271 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 FOXI3A8MTJ6 420 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-228ENST00000557302 C12orf77C9JDV5 145 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 C15orf65H3BRN8 121 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 TOR1AO14656 332 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 SPINT2O43291 252 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 PRRX1P54821 245 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 TMEM50BP56557 158 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 LSM3P62310 102 aaKnown RBP11.02□□□□□ -0.65
SHMT2-228ENST00000557302 ACTG1P63261 375 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 MINOS1Q5TGZ0 78 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 SLC16A12Q6ZSM3 486 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 Q6ZTK2 550 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 OR4P4Q8NGL7 312 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 UBALD1Q8TB05 177 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 NDNFQ8TB73 568 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 MALSU1Q96EH3 234 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 ARHGAP5-AS1Q96IT6 56 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 CHMP1AQ9HD42 196 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-228ENST00000557302 KCNIP1Q9NZI2 227 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 MINOS1-NBL1R4GNA1 71 aa11.02□□□□□ -0.65
SHMT2-228ENST00000557302 F2RL2O00254 374 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms