RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 EGFEM1PQ0D2K5 195 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 SMN1Q16637 294 aaKnown RBP12.56□□□□□ -0.4
TUBB3-213ENST00000557262 DDI2Q5TDH0 399 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 OR2G6Q5TZ20 316 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 SLC35E3Q7Z769 313 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 MOB3BQ86TA1 216 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 LINC00596Q86U02 117 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 PQLC1Q8N2U9 271 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 COMMD1Q8N668 190 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 ZNF555Q8NEP9 628 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 ARL11Q969Q4 196 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 BABAM2Q9NXR7 383 aa12.56□□□□□ -0.4
TUBB3-213ENST00000557262 IGHV1-3A0A0C4DH29 117 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 C15orf65H3BRN8 121 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 CCRL2O00421 344 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 HSD17B6O14756 317 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 GEMIN2O14893 280 aaKnown RBP12.55□□□□□ -0.4
TUBB3-213ENST00000557262 ORC5O43913 435 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 ZNF780AO75290 641 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-213ENST00000557262 SERPINA2P20848 420 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 SLC6A1P30531 599 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 SLC35B1P78383 322 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 MPV17LQ2QL34 196 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 ATAD3CQ5T2N8 411 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 ETV3LQ6ZN32 361 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 OR2W3Q7Z3T1 314 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 FOXRED2Q8IWF2 684 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 EAF1Q96JC9 268 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-213ENST00000557262 MCRIP2Q9BUT9 160 aaKnown RBP12.55□□□□□ -0.4
TUBB3-213ENST00000557262 LINC00527Q9UJ94 153 aa12.55□□□□□ -0.4
TUBB3-213ENST00000557262 SIRT4Q9Y6E7 314 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-213ENST00000557262 WI2-2373I1.2A0A1W2PRP0 233 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 IRGMA1A4Y4 181 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 SDCBPO00560 298 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-213ENST00000557262 GPX5O75715 221 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 MT-ND4P03905 459 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 GTF2F2P13984 249 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-213ENST00000557262 MYCNOSP40205 109 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 GPR176Q14439 515 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 VAX1Q5SQQ9 334 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 STPG2Q8N412 459 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 C8orf31Q8N9H6 132 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 OR2T10Q8NGZ9 312 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 CCDC107Q8WV48 283 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 DPF1Q92782 380 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 GHSRQ92847 366 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 ORAI1Q96D31 301 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 SMIM19Q96E16 107 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 RDH12Q96NR8 316 aa12.54□□□□□ -0.4
TUBB3-213ENST00000557262 ZNF184Q99676 751 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-213ENST00000557262 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-213ENST00000557262 IGHV3-72A0A0B4J1Y9 119 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 LINC01548A6NM66 108 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
TUBB3-213ENST00000557262 NUDT19A8MXV4 375 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-213ENST00000557262 MYL12AP19105 171 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 REG1BP48304 166 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 RIPK1Q13546 671 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 Q3ZCU0 254 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 SLC22A6Q4U2R8 563 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 ZNF497Q6ZNH5 498 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 C18orf65Q6ZTR6 163 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 C8orf86Q6ZUL3 223 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 STX19Q8N4C7 294 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 NEK7Q8TDX7 302 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 ST6GALNAC6Q969X2 333 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 GFOD1Q9NXC2 390 aa12.53□□□□□ -0.4
TUBB3-213ENST00000557262 DIMT1Q9UNQ2 313 aaKnown RBP12.53□□□□□ -0.4
TUBB3-213ENST00000557262 EXOSC1Q9Y3B2 195 aaKnown RBP12.53□□□□□ -0.4
TUBB3-213ENST00000557262 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 A0A1W2PP11 408 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 BAG2O95816 211 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 LALBAP00709 142 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 IL3RAP26951 378 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 CD1BP29016 333 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 Q499Y3 187 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 DMKNQ6E0U4 476 aaPredicted RBP12.52□□□□□ -0.41
TUBB3-213ENST00000557262 TEX38Q6PEX7 206 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 ZNF695Q8IW36 515 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 IZUMO1Q8IYV9 350 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 Q8N6K4 173 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 KLHL30-AS1Q8NEE0 82 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 OR13C5Q8NGS8 318 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 UBALD1Q8TB05 177 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 P2RX4Q99571 388 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 GON7Q9BXV9 100 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 ABCG5Q9H222 651 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 SPACA1Q9HBV2 294 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 LIN7CQ9NUP9 197 aaKnown RBP12.52□□□□□ -0.41
TUBB3-213ENST00000557262 CHCHD3Q9NX63 227 aaKnown RBP12.52□□□□□ -0.41
TUBB3-213ENST00000557262 CKLFQ9UBR5 152 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 CLEC2DQ9UHP7 191 aa12.52□□□□□ -0.41
TUBB3-213ENST00000557262 IGHV3-43A0A0B4J1X8 118 aa12.51□□□□□ -0.41
TUBB3-213ENST00000557262 MCRIP1C9JLW8 97 aa12.51□□□□□ -0.41
TUBB3-213ENST00000557262 AIPO00170 330 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms