RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 GLP1RP43220 463 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 GPR12P47775 334 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 INSL3P51460 131 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 EBI3Q14213 229 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 LTC4SQ16873 150 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 KCTD21Q4G0X4 260 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 SLC16A12Q6ZSM3 486 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 AHSA2Q719I0 299 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 MOB3BQ86TA1 216 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 SAXO1Q8IYX7 474 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 SVOPQ8N4V2 548 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 OR10H4Q8NGA5 316 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 OR51T1Q8NGJ9 327 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 OR5D18Q8NGL1 313 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 RNFT2Q96EX2 444 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 EAF1Q96JC9 268 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-223ENST00000556689 BARHL1Q9BZE3 327 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 NCOR1P1Q9H4R4 102 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 LINC00574Q9H8X3 128 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 NEK6Q9HC98 313 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 PALMDQ9NP74 551 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 DNAH7Q8WXX0 4024 aa9.91□□□□□ -0.82
SHMT2-223ENST00000556689 MEIKINA0A087WXM9 373 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 LCE6AA0A183 80 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 NPIPB11E5RHQ5 1161 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 MYL12BO14950 172 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 RGS10O43665 173 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 IL1AP01583 271 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 MT-ND2P03891 347 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 GAPDHP04406 335 aaKnown RBP9.9□□□□□ -0.82
SHMT2-223ENST00000556689 ISG15P05161 165 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 GABRB1P18505 474 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 KIR3DL2P43630 455 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 GNG10P50151 68 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 CDK5R1Q15078 307 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 FAM220AQ7Z4H9 259 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 OR10A7Q8NGE5 316 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 OR13A1Q8NGR1 328 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 OR2T10Q8NGZ9 312 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 RFESDQ8TAC1 157 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 FBLIM1Q8WUP2 373 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 C4orf3Q8WVX3 66 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 APH1BQ8WW43 257 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 SPACA5Q96QH8 159 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 CCDC90BQ9GZT6 254 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 PLCXD1Q9NUJ7 323 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 LIN7CQ9NUP9 197 aaKnown RBP9.9□□□□□ -0.82
SHMT2-223ENST00000556689 GAR1Q9NY12 217 aaKnown RBP9.9□□□□□ -0.82
SHMT2-223ENST00000556689 KIF25Q9UIL4 384 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 GNG8Q9UK08 70 aa9.9□□□□□ -0.82
SHMT2-223ENST00000556689 EXOSC1Q9Y3B2 195 aaKnown RBP9.9□□□□□ -0.82
SHMT2-223ENST00000556689 IGHV3-72A0A0B4J1Y9 119 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 IGHV1-3A0A0C4DH29 117 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 HSPB6O14558 160 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 MRPS14O60783 128 aaKnown RBP9.89□□□□□ -0.83
SHMT2-223ENST00000556689 WBP4O75554 376 aaKnown RBP9.89□□□□□ -0.83
SHMT2-223ENST00000556689 APOL3O95236 402 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 IGHG4P01861 327 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 TMEM225BP0DP42 221 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 ZNF816Q0VGE8 651 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-223ENST00000556689 FAM27D1Q5T7N8 215 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 Q8N9W7 124 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 OR11H1Q8NG94 326 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 OR2G2Q8NGZ5 317 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 TMEM80Q96HE8 168 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 RASL11BQ9BPW5 248 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 FRRS1LQ9P0K9 344 aa9.89□□□□□ -0.83
SHMT2-223ENST00000556689 A0A1W2PPE3 182 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 DAPL1A0PJW8 107 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 MAGEA13PA6NCF6 341 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 PTGES3LE9PB15 166 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 HSD17B6O14756 317 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 VDAC1P21796 283 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 CRHBPP24387 322 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 DCKP27707 260 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 REG1BP48304 166 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 MTNR1BP49286 362 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 FHL3Q13643 280 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 SMN1Q16637 294 aaKnown RBP9.88□□□□□ -0.83
SHMT2-223ENST00000556689 TP53I3Q53FA7 332 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 PAN3Q58A45 887 aaKnown RBP9.88□□□□□ -0.83
SHMT2-223ENST00000556689 TMPRSS11AQ6ZMR5 421 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 OVCH2Q7RTZ1 564 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 KCTD20Q7Z5Y7 419 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 Q8N6K4 173 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 ACBD7Q8N6N7 88 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 MRGPRDQ8TDS7 321 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-223ENST00000556689 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 PLSCR3Q9NRY6 295 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 PSORS1C1Q9UIG5 152 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 ERGIC3Q9Y282 383 aa9.88□□□□□ -0.83
SHMT2-223ENST00000556689 A0A087WXM4 84 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 TRAV24A0A0B4J272 114 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 MOSP00540 346 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 OR8U8P0C7N1 319 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 GZMHP20718 246 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 PSMB8P28062 276 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms