RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TCF7L1Q9HCS4 588 aa6.5□□□□□ -1.37
VTI1B-206ENST00000556461 SERTAD4Q9NUC0 356 aa6.5□□□□□ -1.37
VTI1B-206ENST00000556461 PSG11Q9UQ72 335 aa6.5□□□□□ -1.37
VTI1B-206ENST00000556461 A0A0A6YYD4 124 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 IGHV3-43A0A0B4J1X8 118 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 SH2D7A6NKC9 451 aaPredicted RBP6.49□□□□□ -1.37
VTI1B-206ENST00000556461 LEUTXA8MZ59 168 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 J3QR06 171 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 TOR1AO14656 332 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 MPIG6BO95866 241 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 IGHV3-43DP0DP04 118 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 VSIG8P0DPA2 414 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 CD37P11049 281 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 CPEP16870 476 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 SRMP19623 302 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 MAPK3P27361 379 aaPredicted RBP6.49□□□□□ -1.37
VTI1B-206ENST00000556461 PRRX1P54821 245 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 FABP5Q01469 135 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 UNC119Q13432 240 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 GPR176Q14439 515 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 HSD17B12Q53GQ0 312 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 C1orf100Q5SVJ3 147 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 RAB12Q6IQ22 244 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 LIAT1Q6ZQX7 453 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 PRSS48Q7RTY5 328 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 Q8N2B8 174 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 KLHDC1Q8N7A1 406 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 NKAIN3Q8N8D7 197 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 OR4K15Q8NH41 348 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 OR9G1Q8NH87 305 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 NEK7Q8TDX7 302 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 PHYHIPQ92561 330 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 ARL11Q969Q4 196 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 UQCC2Q9BRT2 126 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 NPFFR1Q9GZQ6 430 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 MMP28Q9H239 520 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 VCX3BQ9H321 246 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 RANBP3Q9H6Z4 567 aaPredicted RBP6.49□□□□□ -1.37
VTI1B-206ENST00000556461 RAB18Q9NP72 206 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 PEX16Q9Y5Y5 336 aa6.49□□□□□ -1.37
VTI1B-206ENST00000556461 A0A1W2PPI3 338 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 UBE2QL1A1L167 161 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 C12orf77C9JDV5 145 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 AIPO00170 330 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 SLC22A1O15245 554 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 SLC31A2O15432 143 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 AMY1AP04745 511 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 AMY2AP04746 511 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 VSIG10L2P0DP72 767 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 RCC1P18754 421 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-206ENST00000556461 HSPA13P48723 471 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 LOXL3P58215 753 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 QRFPP83859 136 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 MLLT11Q13015 90 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-206ENST00000556461 PLA2G7Q13093 441 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 GPR50Q13585 617 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 HERPUD1Q15011 391 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 P2RY14Q15391 338 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 SSX1Q16384 188 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 SYT6Q5T7P8 510 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-206ENST00000556461 Q6ZPA2 131 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 LYG1Q8N1E2 194 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 GAPTQ8N292 157 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 OR1L1Q8NH94 360 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 OR2T6Q8NHC8 308 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 MRPL30Q8TCC3 161 aaKnown RBP6.48□□□□□ -1.37
VTI1B-206ENST00000556461 WIPF2Q8TF74 440 aaPredicted RBP6.48□□□□□ -1.37
VTI1B-206ENST00000556461 CFHR4Q92496 578 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 MRPS24Q96EL2 167 aaKnown RBP6.48□□□□□ -1.37
VTI1B-206ENST00000556461 MGLLQ99685 303 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 SULT4A1Q9BR01 284 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 NICN1Q9BSH3 213 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 ISYNA1Q9NPH2 558 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 PCDHB16Q9NRJ7 776 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 GFOD1Q9NXC2 390 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 ETAA1Q9NY74 926 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 RAB26Q9ULW5 256 aa6.48□□□□□ -1.37
VTI1B-206ENST00000556461 AK6Q9Y3D8 172 aaKnown RBP6.48□□□□□ -1.37
VTI1B-206ENST00000556461 NOTCH3Q9UM47 2321 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 SHISA3A0PJX4 238 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A10PA6NDY2 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A18PA6NE21 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A16PA6NEW6 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A20PA6NIJ5 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A7PA6NKC0 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A9PA6NNJ1 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 TMEM14DPA8MWL7 114 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A12PA8MX19 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A5PA8MXJ8 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A23PA8MXZ1 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 MCRIP1C9JLW8 97 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 SDCBPO00560 298 aaPredicted RBP6.47□□□□□ -1.37
VTI1B-206ENST00000556461 TIMM23O14925 209 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 ORC5O43913 435 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 PDCD6O75340 191 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A15PP0C7V4 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A13PP0C7W8 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A14PP0C7W9 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 FAM90A24PP0C7X0 464 aa6.47□□□□□ -1.37
VTI1B-206ENST00000556461 CD28P10747 220 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms