RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 OLFML2AQ68BL7 652 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 BAIAP2L2Q6UXY1 529 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 TMEM91Q6ZNR0 172 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 Q6ZSV7 163 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 ABHD12Q8N2K0 398 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 TMEM104Q8NE00 496 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 NDNFQ8TB73 568 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 MRGPRDQ8TDS7 321 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 NEK7Q8TDX7 302 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 TMEM203Q969S6 136 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 KIRREL1Q96J84 757 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 Q96M66 194 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 SELENOIQ9C0D9 397 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 CST11Q9H112 138 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 ZNF286AQ9HBT8 521 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 ACOT13Q9NPJ3 140 aa9.32□□□□□ -0.92
SLIRP-205ENST00000556310 FAM172BPA6NC97 362 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 NPIPB11E5RHQ5 1161 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 H3BUI4 141 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 ARL6IP5O75915 188 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 TSPAN9O75954 239 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 CD37P11049 281 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 SSTR5P35346 364 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 RBM39Q14498 530 aaKnown RBP9.31□□□□□ -0.92
SLIRP-205ENST00000556310 HLA-DRB5Q30154 266 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 PLA1AQ53H76 456 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 RAB12Q6IQ22 244 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 ZNF497Q6ZNH5 498 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 OR10A7Q8NGE5 316 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 OR6M1Q8NGM8 313 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 LINC01006Q8NI28 216 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 PIFOQ8TCI5 191 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 CREB3L1Q96BA8 519 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 BANF2Q9H503 90 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 C16orf95Q9H693 158 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 ABCB10Q9NRK6 738 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 IDI2-AS1Q9NZ38 188 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 DPM3Q9P2X0 92 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 TCF19Q9Y242 345 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 PKD1L1Q8TDX9 2849 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 MGAM2Q2M2H8 2515 aa9.31□□□□□ -0.92
SLIRP-205ENST00000556310 MCRIP1C9JLW8 97 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 F2RL2O00254 374 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 TOR1AO14656 332 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 SLC22A1O15245 554 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 CHST1O43916 411 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 GLAP06280 429 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 NFYBP25208 207 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 FABP5Q01469 135 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 SSX1Q16384 188 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 OR4C13Q8NGP0 309 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 OR9G1Q8NH87 305 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 YTHDF1Q9BYJ9 559 aaKnown RBP9.3□□□□□ -0.92
SLIRP-205ENST00000556310 RANBP3Q9H6Z4 567 aaPredicted RBP9.3□□□□□ -0.92
SLIRP-205ENST00000556310 NDUFB11Q9NX14 153 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 PITPNC1Q9UKF7 332 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 RNF114Q9Y508 228 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 HILPDAQ9Y5L2 63 aa9.3□□□□□ -0.92
SLIRP-205ENST00000556310 TRAV39A0A0B4J263 110 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 A6NDX4 124 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 LEUTXA8MZ59 168 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 AIPO00170 330 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 SLC17A2O00624 439 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 PDCD6O75340 191 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 CA11O75493 328 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 BPNT1O95861 308 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 MPIG6BO95866 241 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 MT-ND4P03905 459 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 GZMHP20718 246 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 FUT3P21217 361 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
SLIRP-205ENST00000556310 HTR2CP28335 458 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 CEACAM3P40198 252 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 ARHGDIBP52566 201 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 PRRX1P54821 245 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 PROK1P58294 105 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 EMX1Q04741 257 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-205ENST00000556310 SIGIRRQ6IA17 410 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 SLC16A12Q6ZSM3 486 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 GAPTQ8N292 157 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 KCNG3Q8TAE7 436 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 GFI1Q99684 422 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 TMEM59Q9BXS4 323 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 NPFFR1Q9GZQ6 430 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 MMP28Q9H239 520 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 ETAA1Q9NY74 926 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-205ENST00000556310 PEX16Q9Y5Y5 336 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 TRRAPQ9Y4A5 3859 aa9.29□□□□□ -0.92
SLIRP-205ENST00000556310 TMEM14DPA8MWL7 114 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 OOSP1A8MZH6 123 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 C15orf65H3BRN8 121 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 BUB1B-PAK6H3BSN5 160 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 J3QR06 171 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 ORC5O43913 435 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 JUNBP17275 347 aaPredicted RBP9.28□□□□□ -0.92
SLIRP-205ENST00000556310 CHATP28329 748 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 RAB13P51153 203 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms