RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CTSGP08311 255 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 S100A2P29034 98 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 COILP38432 576 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-218ENST00000556256 MAGEA6P43360 314 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 MP68P56378 58 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 RAB25P57735 213 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 TMEM249Q2WGJ8 235 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 OLIG3Q7RTU3 272 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 SCXQ7RTU7 201 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 LRRC6Q86X45 466 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 MUC15Q8N387 334 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 C17orf78Q8N4C9 275 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 OR11G2Q8NGC1 345 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 IFT81Q8WYA0 676 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 MRAP2Q96G30 205 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 C20orf166-AS1Q96NR2 134 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 OR8B2Q96RD0 313 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 ARL6Q9H0F7 186 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 OR51E2Q9H255 320 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 FBXL15Q9H469 300 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 SLC23A2Q9UGH3 650 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 PHLDA3Q9Y5J5 127 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 MTCH2Q9Y6C9 303 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 KIAA0232Q92628 1395 aa1.17□□□□□ -2.22
SCFD1-218ENST00000556256 ZNF878C9JN71 531 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 GUSBP08236 651 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 NQO2P16083 231 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 CBX5P45973 191 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 RAB31Q13636 194 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 FLOT2Q14254 428 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 DTD1Q8TEA8 209 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 DDIT4LQ96D03 193 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 ACBD6Q9BR61 282 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 METTL17Q9H7H0 456 aaPredicted RBP1.16□□□□□ -2.22
SCFD1-218ENST00000556256 ZNF286AQ9HBT8 521 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 VPREB3Q9UKI3 123 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 OR51B4Q9Y5P0 310 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 URGCP-MRPS24S4R325 110 aa1.16□□□□□ -2.22
SCFD1-218ENST00000556256 PTPRKQ15262 1439 aa1.15□□□□□ -2.22
SCFD1-218ENST00000556256 VWA8A3KMH1 1905 aa1.15□□□□□ -2.22
SCFD1-218ENST00000556256 NUP205Q92621 2012 aa1.15□□□□□ -2.22
SCFD1-218ENST00000556256 G3V3Q6 166 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 GPR171O14626 319 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 GYPCP04921 128 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 LIMS3P0CW19 117 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 LIMS4P0CW20 117 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 OR12D1P0DN82 309 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 AKR1C4P17516 323 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 SPAM1P38567 509 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 HSPA13P48723 471 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 RAB2AP61019 212 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 FAM3AP98173 230 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 SKP2Q13309 424 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 PAFAH1B3Q15102 231 aaKnown RBP1.15□□□□□ -2.23
SCFD1-218ENST00000556256 OR8G1Q15617 311 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 USF2Q15853 346 aaPredicted RBP1.15□□□□□ -2.23
SCFD1-218ENST00000556256 RBM48Q5RL73 367 aaKnown RBP1.15□□□□□ -2.23
SCFD1-218ENST00000556256 NOXRED1Q6NXP6 359 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 ZFAND2AQ8N6M9 145 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 OR10P1Q8NGE3 313 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 OR9I1Q8NGQ6 314 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 CD200R1Q8TD46 325 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 LMX1AQ8TE12 382 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 FAM210AQ96ND0 272 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 CYTH2Q99418 400 aa1.15□□□□□ -2.23
SCFD1-218ENST00000556256 ARGFXA6NJG6 315 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 C17orf98A8MV24 154 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 MKRN2OSH3BPM6 223 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 PLXNB1O43157 2135 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 DENRO43583 198 aaKnown RBP1.14□□□□□ -2.23
SCFD1-218ENST00000556256 SYNGR1O43759 233 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 SLC25A20O43772 301 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 UGT2B11O75310 529 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 PSG4Q00888 419 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 SLAMF1Q13291 335 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 APOFQ13790 326 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 CST6Q15828 149 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 ZNF181Q2M3W8 571 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 Q6ZRU5 148 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 VN1R4Q7Z5H5 301 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 MTERF4Q7Z6M4 381 aaKnown RBP1.14□□□□□ -2.23
SCFD1-218ENST00000556256 TCAIMQ8N3R3 496 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 OR11L1Q8NGX0 322 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 ANGPTL6Q8NI99 470 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 SUN5Q8TC36 379 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 SPPL2BQ8TCT7 592 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 HIST1H2BAQ96A08 127 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 CCDC127Q96BQ5 260 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 STACQ99469 402 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 TREM1Q9NP99 234 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 MRPL16Q9NX20 251 aaKnown RBP1.14□□□□□ -2.23
SCFD1-218ENST00000556256 ZNF337Q9Y3M9 751 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 MMACHCQ9Y4U1 282 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 NLRC5Q86WI3 1866 aa1.14□□□□□ -2.23
SCFD1-218ENST00000556256 COL18A1P39060 1754 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 CEP170Q5SW79 1584 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 AK9Q5TCS8 1911 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 IQCF5A8MTL0 148 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 HSBP1L1C9JCN9 74 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 SULT1C2O00338 296 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms