RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 IFT22Q9H7X7 185 aa11.21□□□□□ -0.61
CHMP4BP1-201ENST00000556017 STARD9Q9P2P6 4700 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CCRL2O00421 344 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 IGHG4P01861 327 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GAPDHP04406 335 aaKnown RBP11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OCM2P0CE71 109 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OCMP0CE72 109 aaPredicted RBP11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 PSMB8P28062 276 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 KCNJ3P48549 501 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 F2RL1P55085 397 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GPR50Q13585 617 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 XAF1Q6GPH4 301 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 UNQ9370/PRO34162Q6UXP9 181 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 FOXRED2Q8IWF2 684 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SYS1Q8N2H4 156 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 C8orf31Q8N9H6 132 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF439Q8NDP4 499 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR10X1Q8NGY0 326 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 TNFAIP8L1Q8WVP5 186 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RTN4IP1Q8WWV3 396 aaPredicted RBP11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ASCL2Q99929 193 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ALG8Q9BVK2 526 aa11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 DPCDQ9BVM2 203 aaPredicted RBP11.2□□□□□ -0.62
CHMP4BP1-201ENST00000556017 A0A1W2PP11 408 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 TMEM212A6NML5 194 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CDRT1O95170 752 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ELANEP08246 267 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 FCGR1AP12314 374 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GTF2A1P52655 376 aaPredicted RBP11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF134P52741 427 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF137PP52743 207 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GP2P55259 537 aaKnown RBP11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RAB25P57735 213 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 NHLRC3Q5JS37 347 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 C9orf66Q5T8R8 295 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 MEDAGQ5VYS4 303 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 MOB3BQ86TA1 216 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR52M1Q8NGK5 317 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR8U1Q8NH10 309 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 S1PR3Q99500 378 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 IMPAD1Q9NX62 359 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ERVK13-1Q9NX77 482 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GFOD1Q9NXC2 390 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 TAS2R4Q9NYW5 299 aa11.19□□□□□ -0.62
CHMP4BP1-201ENST00000556017 IGHV3-43A0A0B4J1X8 118 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SEC14L6B5MCN3 397 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 EI24O14681 340 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GEMIN2O14893 280 aaKnown RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 IGHV3-43DP0DP04 118 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CD1BP29016 333 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ECI1P42126 302 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RBM11P57052 281 aaKnown RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZIK1Q3SY52 487 aaPredicted RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR5M8Q8NGP6 311 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR2T10Q8NGZ9 312 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR5AK2Q8NH90 309 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 C4orf3Q8WVX3 66 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ORAI1Q96D31 301 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 AMBNQ9NP70 447 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 IL36GQ9NZH8 169 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZMAT5Q9UDW3 170 aaKnown RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF580Q9UK33 172 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ST3GAL6Q9Y274 331 aa11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SIRT4Q9Y6E7 314 aaPredicted RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 EPPK1P58107 5090 aaKnown RBP11.18□□□□□ -0.62
CHMP4BP1-201ENST00000556017 C3orf84H3BNL1 204 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 H3BNX3 289 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 MPZL2O60487 215 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 HTR3BO95264 441 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 MT-ND4P03905 459 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 IGF1P05019 195 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 LIMS3P0CW19 117 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 LIMS4P0CW20 117 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RAB3AP20336 220 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GZMHP20718 246 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SOX2P48431 317 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CXorf66Q5JRM2 361 aaPredicted RBP11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 C1orf146Q5VVC0 180 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF497Q6ZNH5 498 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SLC25A48Q6ZT89 311 aaKnown RBP11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ARL11Q969Q4 196 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 JAM3Q9BX67 310 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 FAM53CQ9NYF3 392 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
CHMP4BP1-201ENST00000556017 I3L521 148 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ORC5O43913 435 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 MOSP00540 346 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CHATP28329 748 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RSU1Q15404 277 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 KLHL22Q53GT1 634 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CT45A1Q5HYN5 189 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SATL1Q86VE3 508 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GAPTQ8N292 157 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR52I1Q8NGK6 324 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms