RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 LHX2P50458 406 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 SNRPEP62304 92 aaKnown RBP5.99□□□□□ -1.45
TDP1-213ENST00000555880 TLE4Q04727 773 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 OR8G1Q15617 311 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 EIF2S3LQ2VIR3 472 aaKnown RBP5.99□□□□□ -1.45
TDP1-213ENST00000555880 AKR1C8PQ5T2L2 129 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 SLC25A24Q6NUK1 477 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 DPPA3Q6W0C5 159 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 ETV3LQ6ZN32 361 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 TUSC5Q8IXB3 177 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 TMEM252Q8N6L7 170 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 CLEC18CQ8NCF0 446 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 LOXL4Q96JB6 756 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 TCEAL7Q9BRU2 100 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 C11orf1Q9H5F2 150 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 MTCH1Q9NZJ7 389 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 MPC1Q9Y5U8 109 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 FREM1Q5H8C1 2179 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 CFAP54Q96N23 3096 aa5.99□□□□□ -1.45
TDP1-213ENST00000555880 A6NLC8 198 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 CD300LBA8K4G0 201 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 DFFBO76075 338 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 CST7O76096 145 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 IFNA5P01569 189 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 HBE1P02100 147 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 SMIM6P0DI80 62 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 DYNLT3P51808 116 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 CLDN18P56856 261 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 RPL23AP62750 156 aaKnown RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 GNG3P63215 75 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 PLGLB1Q02325 96 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 IL24Q13007 206 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 DAZAP2Q15038 168 aaPredicted RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 RNPS1Q15287 305 aaKnown RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 NMSQ5H8A3 153 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 CXorf66Q5JRM2 361 aaPredicted RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 TIPARPQ7Z3E1 657 aaKnown RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 TMEM217Q8N7C4 229 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 OR5P3Q8WZ94 311 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 RBMXL1Q96E39 390 aaKnown RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 IP6K3Q96PC2 410 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 ATP5SQ99766 215 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 DDA1Q9BW61 102 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 SCRT1Q9BWW7 348 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 SMOC1Q9H4F8 434 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 IFT22Q9H7X7 185 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 CCL28Q9NRJ3 127 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 KIAA1456Q9P272 454 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 OR2W1Q9Y3N9 320 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 PUS1Q9Y606 427 aaKnown RBP eCLIP5.98□□□□□ -1.45
TDP1-213ENST00000555880 KMT2EQ8IZD2 1858 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 TRBV6-6A0A0A6YYG2 114 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 IGKV1D-13A0A0B4J2D9 117 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 A0A1B0GU03 582 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 MED19A0JLT2 244 aaPredicted RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 FAM166BA8MTA8 275 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 CDRT15L2A8MXV6 281 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 PROB1E7EW31 1015 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 UBE2CO00762 179 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 DEGS1O15121 323 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 TNFSF12O43508 249 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 CHST1O43916 411 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 EIF3GO75821 320 aaKnown RBP eCLIP5.98□□□□□ -1.45
TDP1-213ENST00000555880 NEURL1O76050 574 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 OR2C1O95371 312 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 IFNA17P01571 189 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 ZNF806P0C7X5 589 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 IGKV1-13P0DP09 117 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 SLC25A6P12236 298 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 DAOP14920 347 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 AGAP20933 346 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 F2RP25116 425 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 LMO1P25800 156 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 HLA-DRB3P79483 266 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 ID3Q02535 119 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 HERPUD1Q15011 391 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 OR1C1Q15619 314 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 HIKESHIQ53FT3 197 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 TMEM164Q5U3C3 297 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 MOB1BQ7L9L4 216 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 FAM58AQ8N1B3 248 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 LILRB1Q8NHL6 650 aaPredicted RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 MRPL30Q8TCC3 161 aaKnown RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 ISOC2Q96AB3 205 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 POM121L2Q96KW2 1035 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 RAB40CQ96S21 281 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 GPR87Q9BY21 358 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 ZNF552Q9H707 407 aaPredicted RBP5.98□□□□□ -1.45
TDP1-213ENST00000555880 IL36RNQ9UBH0 155 aa5.98□□□□□ -1.45
TDP1-213ENST00000555880 FAM186AA6NE01 2351 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 hCG_1809904A0A1W2PP81 198 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 A0A1W2PR64 198 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 A0A1W2PRV1 198 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 C5orf52A6NGY3 159 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 C21orf140B9A014 251 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 HS3ST1O14792 307 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 SYNGR1O43759 233 aa5.97□□□□□ -1.45
TDP1-213ENST00000555880 SS18L1O75177 396 aaPredicted RBP5.97□□□□□ -1.45
TDP1-213ENST00000555880 PGLYRP1O75594 196 aaPredicted RBP5.97□□□□□ -1.45
TDP1-213ENST00000555880 CNOT4O95628 575 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms