RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 CSAG2Q9Y5P2 127 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 HIST1H1EP10412 219 aaKnown RBP7.38□□□□□ -1.23
LINC00641-201ENST00000555379 HLA-DRB3P79483 266 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 PNRC1Q12796 327 aaPredicted RBP7.38□□□□□ -1.23
LINC00641-201ENST00000555379 OR5AP2Q8NGF4 316 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 ZNRF4Q8WWF5 429 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 SIGMAR1Q99720 223 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 TMEM191AQ9H0A3 160 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 SLC52A3Q9NQ40 469 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 COX6A1P12074 109 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 HIST1H1BP16401 226 aaKnown RBP7.38□□□□□ -1.23
LINC00641-201ENST00000555379 GALR1P47211 349 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 CDX1P47902 265 aaPredicted RBP7.38□□□□□ -1.23
LINC00641-201ENST00000555379 CBLN2Q8IUK8 224 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 SLC25A45Q8N413 288 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 C9orf62Q8N4C0 152 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 GPR32P1Q8NGA4 272 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 NUDT8Q8WV74 236 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 STARD4Q96DR4 205 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 TXNDC17Q9BRA2 123 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 NMES1Q9C002 83 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 SLC35B3Q9H1N7 401 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 TRBV5-3A0A0A0MS03 114 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 A0A1B0GTH9 108 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 CHEK1O14757 476 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 SYNGR3O43761 229 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 MRGPRGQ86SM5 289 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 LYG1Q8N1E2 194 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 Q8WTZ3 238 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 TNFRSF14Q92956 283 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 IL22RA2Q969J5 263 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 DNAJC4Q9NNZ3 241 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 CLCF1Q9UBD9 225 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 CLEC2DQ9UHP7 191 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 A0A1B0GW15 77 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 DNASE2O00115 360 aaPredicted RBP7.38□□□□□ -1.23
LINC00641-201ENST00000555379 CEACAM6P40199 344 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 OR8G2PQ6IF36 304 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 PCSK4Q6UW60 755 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 TMEM182Q6ZP80 229 aaPredicted RBP7.38□□□□□ -1.23
LINC00641-201ENST00000555379 FAM57AQ8TBR7 257 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 TMEM204Q9BSN7 226 aa7.38□□□□□ -1.23
LINC00641-201ENST00000555379 SOX21Q9Y651 276 aaPredicted RBP7.38□□□□□ -1.23
LINC00641-201ENST00000555379 ZNF638Q14966 1978 aaKnown RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 ZIC2O95409 532 aaPredicted RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SFT2D2O95562 160 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 CT62P0C5K7 136 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 UBE2V2Q15819 145 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 Q1RN00 199 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SPANXN5Q5MJ07 72 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 ZNF362Q5T0B9 420 aaPredicted RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 ZNF343Q6P1L6 599 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SLC22A18ASQ8N1D0 253 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 OR1L8Q8NGR8 309 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 OR2J1Q9GZK6 312 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 RBM38Q9H0Z9 239 aaKnown RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SH2D2AQ9NP31 389 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 PLEKHB1Q9UF11 243 aaPredicted RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 WASHC3Q9Y3C0 194 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 GOLGA4Q13439 2230 aaKnown RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 HSBP1O75506 76 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 NDUFB6O95139 128 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 HOXB3P14651 431 aaPredicted RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 VDAC1P21796 283 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 TNFRSF9Q07011 255 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 DPPA3Q6W0C5 159 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 OR10W1Q8NGF6 305 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 OR1K1Q8NGR3 316 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 NUDCD2Q8WVJ2 157 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 LHX4Q969G2 390 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SAT2Q96F10 170 aaPredicted RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 CHST2Q9Y4C5 530 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 HS3ST3B1Q9Y662 390 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 KCNAB3O43448 404 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 PCOLCEQ15113 449 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 DMKNQ6E0U4 476 aaPredicted RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 LAMTOR1Q6IAA8 161 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 ACSM6Q6P461 480 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 NIT1Q86X76 327 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 BPIFA4PQ86YQ2 179 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 OR5AU1Q8NGC0 362 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 RPS4Y2Q8TD47 263 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SEC22AQ96IW7 307 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 TIMP4Q99727 224 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 RPL36A-HNRNPH2H7BZ11 118 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 HRH1P35367 487 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SELENOTP62341 195 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 FABP5Q01469 135 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 GPNMBQ14956 572 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 INPP5JQ15735 1006 aaPredicted RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 CEACAM21Q3KPI0 293 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 LRP11Q86VZ4 500 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 SFRP2Q96HF1 295 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 ZNF426Q9BUY5 554 aa7.37□□□□□ -1.23
LINC00641-201ENST00000555379 PEF1Q9UBV8 284 aaKnown RBP7.37□□□□□ -1.23
LINC00641-201ENST00000555379 MYO9BQ13459 2157 aa7.36□□□□□ -1.23
LINC00641-201ENST00000555379 PATE3B3GLJ2 98 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms