RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 DIRAS3O95661 229 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 OR3A1P47881 315 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 KLF3P57682 345 aaPredicted RBP7.48□□□□□ -1.21
TDP1-210ENST00000554976 FAM90A1Q86YD7 464 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 H1FOOQ8IZA3 346 aaPredicted RBP7.48□□□□□ -1.21
TDP1-210ENST00000554976 CD177Q8N6Q3 437 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 LRTM2Q8N967 370 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 Q8TCH9 128 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 PHB2Q99623 299 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 CHIAQ9BZP6 476 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 PRR13Q9NZ81 148 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 NDRG3Q9UGV2 375 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 METRNQ9UJH8 293 aa7.48□□□□□ -1.21
TDP1-210ENST00000554976 PRRC2CQ9Y520 2896 aaKnown RBP7.47□□□□□ -1.21
TDP1-210ENST00000554976 RFPL4AA6NLU0 287 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 MPTX1A8MV57 137 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 RFPL4AL1F8VTS6 287 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 IFNL4K9M1U5 179 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 PPYP01298 95 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 CD55P08174 381 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 SLC25A4P12235 298 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 PTAFRP25105 342 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 FCGR2CP31995 323 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 ASCL1P50553 236 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 RND3P61587 244 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 TSPAN5P62079 268 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 TFF3Q07654 80 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 RBM39Q14498 530 aaKnown RBP7.47□□□□□ -1.21
TDP1-210ENST00000554976 TMEM187Q14656 261 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 GCSAMQ8N6F7 178 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 OR4A4PQ8NGN8 299 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 PIK3IP1Q96FE7 263 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 COQ2Q96H96 371 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 SYT3Q9BQG1 590 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 GSX2Q9BZM3 304 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 RAB18Q9NP72 206 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 SDHAF2Q9NX18 166 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 IGKV1D-13A0A0B4J2D9 117 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 A8MXK9 166 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 WRBO00258 174 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 HSPB6O14558 160 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 CCSO14618 274 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 ATXN7O15265 892 aaPredicted RBP7.47□□□□□ -1.21
TDP1-210ENST00000554976 ZNF737O75373 536 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 IGHV1-46P01743 117 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 IGKV1-13P0DP09 117 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 GNRHRP30968 328 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 BSPH1Q075Z2 132 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 ADIPOQQ15848 244 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 CR1LQ2VPA4 569 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 NCMAPQ5T1S8 102 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 RDH5Q92781 318 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 C18orf12Q96KH6 178 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 NMES1Q9C002 83 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 CLEC4MQ9H2X3 399 aaPredicted RBP7.47□□□□□ -1.21
TDP1-210ENST00000554976 BIN3Q9NQY0 253 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 SH3BGRL2Q9UJC5 107 aa7.47□□□□□ -1.21
TDP1-210ENST00000554976 IGKV1D-17A0A075B6S4 117 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 IGHV3-64DA0A0J9YX35 117 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 SIRPB1O00241 398 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 SH2D1BO14796 132 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 NXPH2O95156 264 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 TFF1P04155 84 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 RCC1P18754 421 aaPredicted RBP7.46□□□□□ -1.21
TDP1-210ENST00000554976 RPS23P62266 143 aaKnown RBP7.46□□□□□ -1.21
TDP1-210ENST00000554976 SLC35E4Q6ICL7 350 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 LIN54Q6MZP7 749 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 MOB1BQ7L9L4 216 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 OR2Z1Q8NG97 314 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 C1orf123Q9NWV4 160 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 PCDHB10Q9UN67 800 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 KALRNO60229 2985 aa7.46□□□□□ -1.21
TDP1-210ENST00000554976 KIR2DS1A0A191URI9 304 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 SIAH2O43255 324 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 ZNF728P0DKX0 622 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 RPA2P15927 270 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 KIR2DS4P43632 304 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 MZT1Q08AG7 82 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 EIF4EBP1Q13541 118 aaPredicted RBP7.46□□□□□ -1.22
TDP1-210ENST00000554976 KIR2DS1Q14954 304 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 TESK1Q15569 626 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 TMEM108Q6UXF1 575 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 ZGRF1Q86YA3 2104 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 MSI2Q96DH6 328 aaKnown RBP7.46□□□□□ -1.22
TDP1-210ENST00000554976 TMEM68Q96MH6 324 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 OR2V2Q96R30 315 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 MS4A7Q9GZW8 240 aaPredicted RBP7.46□□□□□ -1.22
TDP1-210ENST00000554976 NAA60Q9H7X0 242 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 IL19Q9UHD0 177 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 MAB21L2Q9Y586 359 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 TMEM8BA6NDV4 472 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 NFYAP23511 347 aaPredicted RBP7.46□□□□□ -1.22
TDP1-210ENST00000554976 SLC9A3R2Q15599 337 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 OR11L1Q8NGX0 322 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 OR10C1Q96KK4 312 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 SLC2A9Q9NRM0 540 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 TAAR3PQ9P1P4 343 aa7.46□□□□□ -1.22
TDP1-210ENST00000554976 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
TDP1-210ENST00000554976 MED19A0JLT2 244 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms