RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CD3EP07766 207 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 RBM39Q14498 530 aaKnown RBP14.73□□□□□ -0.05
SHOX-204ENST00000554971 DMRTC1Q5HYR2 192 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 Q6ZS49 121 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 MAFIPQ8WZ33 124 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 RRNAD1Q96FB5 475 aaKnown RBP14.73□□□□□ -0.05
SHOX-204ENST00000554971 SYT3Q9BQG1 590 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 SUCNR1Q9BXA5 334 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 OPA3Q9H6K4 179 aa14.73□□□□□ -0.05
SHOX-204ENST00000554971 ZNF850A8MQ14 1090 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 GOSR1O95249 250 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 ZNF728P0DKX0 622 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 FUT3P21217 361 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 PLP2Q04941 152 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 RAB32Q13637 225 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 SMCO1Q147U7 214 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 PLCXD3Q63HM9 321 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 SLC22A25Q6T423 547 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 UNQ6126/PRO20091Q6UXV3 157 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 OR10AD1Q8NGE0 317 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 OR51F2Q8NH61 342 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 REPIN1Q9BWE0 567 aaKnown RBP14.72□□□□□ -0.05
SHOX-204ENST00000554971 PLEKHF2Q9H8W4 249 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 ST3GAL6Q9Y274 331 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 C5orf49A4QMS7 147 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 CRYAAP02489 173 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 WNT5AP41221 380 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 RBM11P57052 281 aaKnown RBP14.72□□□□□ -0.05
SHOX-204ENST00000554971 TMEM200AQ86VY9 491 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 SLC38A6Q8IZM9 456 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 FBXL14Q8N1E6 418 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 SULT4A1Q9BR01 284 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 SLC5A7Q9GZV3 580 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 PLEKHA2Q9HB19 425 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 C12orf4Q9NQ89 552 aa14.72□□□□□ -0.05
SHOX-204ENST00000554971 IGKV1-12A0A0C4DH73 117 aa14.71□□□□□ -0.05
SHOX-204ENST00000554971 IGKV1D-12P01611 117 aa14.71□□□□□ -0.05
SHOX-204ENST00000554971 GAPDHP04406 335 aaKnown RBP14.71□□□□□ -0.05
SHOX-204ENST00000554971 NKX6-1P78426 367 aaPredicted RBP14.71□□□□□ -0.05
SHOX-204ENST00000554971 IAH1Q2TAA2 248 aaPredicted RBP14.71□□□□□ -0.05
SHOX-204ENST00000554971 PIGCQ92535 297 aa14.71□□□□□ -0.05
SHOX-204ENST00000554971 ARL11Q969Q4 196 aa14.71□□□□□ -0.05
SHOX-204ENST00000554971 OR5AC2Q9NZP5 309 aa14.71□□□□□ -0.05
SHOX-204ENST00000554971 PCDHB10Q9UN67 800 aa14.71□□□□□ -0.05
SHOX-204ENST00000554971 E7EQL1 145 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 GEMIN2O14893 280 aaKnown RBP14.7□□□□□ -0.06
SHOX-204ENST00000554971 CST4P01036 141 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 HOXB5P09067 269 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 CCNOP22674 350 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 APLNRP35414 380 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 GLP1RP43220 463 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 BTN1A1Q13410 526 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 MSMPQ1L6U9 139 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 ZNF672Q499Z4 452 aaPredicted RBP14.7□□□□□ -0.06
SHOX-204ENST00000554971 ABCA11PQ4W5N1 156 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 IL34Q6ZMJ4 242 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 FAM185AQ8N0U4 392 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 NRGNQ92686 78 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 APOBEC3DQ96AK3 386 aaPredicted RBP14.7□□□□□ -0.06
SHOX-204ENST00000554971 NAA60Q9H7X0 242 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 MPTX1A8MV57 137 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 PIGPP57054 158 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 TBC1D28Q2M2D7 210 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 CCDC71LQ8N9Z2 235 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 MOB3AQ96BX8 217 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 HDHD3Q9BSH5 251 aaPredicted RBP14.7□□□□□ -0.06
SHOX-204ENST00000554971 LIME1Q9H400 295 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 GSKIPQ9P0R6 139 aa14.7□□□□□ -0.06
SHOX-204ENST00000554971 PQLC2LA1A4F0 135 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 DEDDO75618 318 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 JTBO76095 146 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 NGFP01138 241 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 APOC3P02656 99 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 SFTPBP07988 381 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 FAM157CP0CG43 387 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 BPIFCQ8NFQ6 507 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 OR1S2Q8NGQ3 325 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 OR51B6Q9H340 312 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 MMP26Q9NRE1 261 aa14.69□□□□□ -0.06
SHOX-204ENST00000554971 ERVS71-1P61550 626 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 SRPXP78539 464 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 ZNF273Q14593 569 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 TMEM187Q14656 261 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 GGNBP1Q5YKI7 109 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 RTN4IP1Q8WWV3 396 aaPredicted RBP14.68□□□□□ -0.06
SHOX-204ENST00000554971 CISD1Q9NZ45 108 aaKnown RBP14.68□□□□□ -0.06
SHOX-204ENST00000554971 STARD10Q9Y365 291 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 CHD3Q12873 2000 aaKnown RBP14.68□□□□□ -0.06
SHOX-204ENST00000554971 TMEM218A2RU14 115 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 MSGN1A6NI15 193 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 K7EPK0 472 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 SMPD2O60906 423 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 HKR1P10072 659 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 S100A10P60903 97 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 CEACAM21Q3KPI0 293 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 PIGYQ3MUY2 71 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 LINC00596Q86U02 117 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 LGI3Q8N145 548 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 FAM71E2Q8N5Q1 922 aa14.68□□□□□ -0.06
SHOX-204ENST00000554971 ZNF611Q8N823 705 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms