RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 NTN4Q9HB63 628 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 NECAP2Q9NVZ3 263 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 NMRK1Q9NWW6 199 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 MYEF2Q9P2K5 600 aaKnown RBP0.95□□□□□ -2.26
PRPF39-208ENST00000554785 ING4Q9UNL4 249 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 MMACHCQ9Y4U1 282 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 HERC2O95714 4834 aa0.95□□□□□ -2.26
PRPF39-208ENST00000554785 DNAH1Q9P2D7 4330 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 hCG_1818297A0A087WSY0 165 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 A0A0J9YW62 118 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SMCO3A2RU48 225 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CLPSL1A2RUU4 121 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 F6UB75 175 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 M0R233 179 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 NDUFS8O00217 210 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 RAB29O14966 203 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 MRPS12O15235 138 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ANGPTL7O43827 346 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CTNSO60931 367 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SPAG7O75391 227 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 BANF1O75531 89 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PROSCO94903 275 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 UTS2O95399 124 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 AIFM1O95831 613 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CLIC3O95833 236 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CLPSP04118 112 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TACSTD2P09758 323 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CECR9P0C854 216 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF32P17041 273 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 HIST1H1TP22492 207 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 GTF2E2P29084 291 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 HRH1P35367 487 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 NAA10P41227 235 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 MNAT1P51948 309 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ERVS71-1P61550 626 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 NUTF2P61970 127 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ACTA2P62736 377 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ACTG2P63267 376 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ACTC1P68032 377 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ACTA1P68133 377 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PAX5Q02548 391 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 RBMY1FQ15415 496 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 LY6EQ16553 131 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TMEM176BQ3YBM2 270 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CCNJQ5T5M9 372 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR52W1Q6IF63 320 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ANKRD26P1Q6NSI1 321 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SASS6Q6UVJ0 657 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SCIMPQ6UWF3 145 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 Q6ZT83 130 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OAFQ86UD1 273 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 LRP11Q86VZ4 500 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ST13P4Q8IZP2 240 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 STPG2Q8N412 459 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TBC1D19Q8N5T2 526 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR7G2Q8NG99 324 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR52E2Q8NGJ4 325 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR9A2Q8NGT5 310 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR10R2Q8NGX6 335 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 GPR119Q8TDV5 335 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZFP90Q8TF47 636 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 FAM3DQ96BQ1 224 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PKNOX2Q96KN3 472 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 AIF1LQ9BQI0 150 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 MRPL37Q9BZE1 423 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TBL1XR1Q9BZK7 514 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 RAB1BQ9H0U4 201 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 VCXQ9H320 206 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 FGF20Q9NP95 211 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 GOLT1BQ9Y3E0 138 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 BZW2Q9Y6E2 419 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PKHD1P08F94 4074 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 FLG2Q5D862 2391 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 KCNE1BA0A087WTH5 132 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 IGHV1-18A0A0C4DH31 117 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF816-ZNF321PA0A0X1KG74 233 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 BTNL10A8MVZ5 291 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 H0YHG0 523 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 APOC4-APOC2K7ER74 178 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PLPP1O14494 284 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 AIM2O14862 343 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 LSM1O15116 133 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 MAGEB4O15481 346 aaPredicted RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ERLIN1O75477 346 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 TSPAN13O95857 204 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 APOC2P02655 101 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 FABP3P05413 133 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CRHP06850 196 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 SERPINA6P08185 405 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 GNAO1P09471 354 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CCDC172P0C7W6 258 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PABPC4LP0CB38 370 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 OR8G3PP0DMU2 310 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PRPS2P11908 318 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF250P15622 560 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 CCNOP22674 350 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 DEKP35659 375 aaKnown RBP0.94□□□□□ -2.26
PRPF39-208ENST00000554785 AQP2P41181 271 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 PPP1R2P41236 205 aa0.94□□□□□ -2.26
PRPF39-208ENST00000554785 AQP5P55064 265 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms