RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 C8orf31Q8N9H6 132 aa18.94■□□□□ 0.62
FOXA1-204ENST00000554607 MUC7Q8TAX7 377 aa18.94■□□□□ 0.62
FOXA1-204ENST00000554607 TNFAIP8L1Q8WVP5 186 aa18.94■□□□□ 0.62
FOXA1-204ENST00000554607 S1PR3Q99500 378 aa18.94■□□□□ 0.62
FOXA1-204ENST00000554607 GPER1Q99527 375 aa18.94■□□□□ 0.62
FOXA1-204ENST00000554607 DPCDQ9BVM2 203 aaPredicted RBP18.94■□□□□ 0.62
FOXA1-204ENST00000554607 PLSCR3Q9NRY6 295 aa18.94■□□□□ 0.62
FOXA1-204ENST00000554607 SMAD5-AS1Q9Y6J3 95 aa18.94■□□□□ 0.62
FOXA1-204ENST00000554607 TRAV39A0A0B4J263 110 aa18.93■□□□□ 0.62
FOXA1-204ENST00000554607 SNTNA6NMZ2 147 aa18.93■□□□□ 0.62
FOXA1-204ENST00000554607 FHL3Q13643 280 aa18.93■□□□□ 0.62
FOXA1-204ENST00000554607 SLC25A30Q5SVS4 291 aa18.93■□□□□ 0.62
FOXA1-204ENST00000554607 SATL1Q86VE3 508 aa18.93■□□□□ 0.62
FOXA1-204ENST00000554607 DHDHQ9UQ10 334 aa18.93■□□□□ 0.62
FOXA1-204ENST00000554607 RYR2Q92736 4967 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 TMEM212A6NML5 194 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 OR5H8P0DN80 308 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 RAB3AP20336 220 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 CFHR3Q02985 330 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 PIGYQ3MUY2 71 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 CASC10Q5T4H9 136 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 LPCAT4Q643R3 524 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 SUMF2Q8NBJ7 301 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 TMEM104Q8NE00 496 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 OR11H1Q8NG94 326 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 RTN4IP1Q8WWV3 396 aaPredicted RBP18.92■□□□□ 0.62
FOXA1-204ENST00000554607 CHCHD6Q9BRQ6 235 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 IFT22Q9H7X7 185 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 ZNF580Q9UK33 172 aa18.92■□□□□ 0.62
FOXA1-204ENST00000554607 TMEM30CPA0ZSE6 113 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 SDCBPO00560 298 aaPredicted RBP18.91■□□□□ 0.62
FOXA1-204ENST00000554607 GABRPO00591 440 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 HTR3BO95264 441 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 LY86O95711 162 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 SOX6P35712 828 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 SYS1Q8N2H4 156 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 OR5AK2Q8NH90 309 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 TSEN15Q8WW01 171 aaKnown RBP18.91■□□□□ 0.62
FOXA1-204ENST00000554607 ARL11Q969Q4 196 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 ST6GALNAC6Q969X2 333 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 FAM192AQ9GZU8 254 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 OAZ3Q9UMX2 235 aa18.91■□□□□ 0.62
FOXA1-204ENST00000554607 EXOGQ9Y2C4 368 aaKnown RBP18.91■□□□□ 0.62
FOXA1-204ENST00000554607 DYNC2H1Q8NCM8 4307 aaKnown RBP18.91■□□□□ 0.62
FOXA1-204ENST00000554607 DNAH7Q8WXX0 4024 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 TXNL1O43396 289 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 IGF1P05019 195 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 OR8U8P0C7N1 319 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 PSMB8P28062 276 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 SNRPGP62308 76 aaKnown RBP18.9■□□□□ 0.62
FOXA1-204ENST00000554607 MRPL28Q13084 256 aaKnown RBP18.9■□□□□ 0.62
FOXA1-204ENST00000554607 GALEQ14376 348 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 Q3ZCU0 254 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 ASCL4Q6XD76 172 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 OR10K1Q8NGX5 313 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 CENPNQ96H22 339 aaPredicted RBP18.9■□□□□ 0.62
FOXA1-204ENST00000554607 CHCHD3Q9NX63 227 aaKnown RBP18.9■□□□□ 0.62
FOXA1-204ENST00000554607 GFOD1Q9NXC2 390 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 ST3GAL6Q9Y274 331 aa18.9■□□□□ 0.62
FOXA1-204ENST00000554607 HUWE1Q7Z6Z7 4374 aaKnown RBP18.9■□□□□ 0.62
FOXA1-204ENST00000554607 C15orf65H3BRN8 121 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 ORC5O43913 435 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 OR7C1O76099 320 aaPredicted RBP18.89■□□□□ 0.61
FOXA1-204ENST00000554607 NHLRC3Q5JS37 347 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 LHFPL3Q86UP9 236 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 FAM71E2Q8N5Q1 922 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 KCTD7Q96MP8 289 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 HSPB9Q9BQS6 159 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 ALG8Q9BVK2 526 aa18.89■□□□□ 0.61
FOXA1-204ENST00000554607 SORL1Q92673 2214 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 FAM27D1Q5T7N8 215 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF529Q6P280 563 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 TMEM65Q6PI78 240 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 LINC00596Q86U02 117 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 OR1N2Q8NGR9 330 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 UBE2E2Q96LR5 201 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 RCHY1Q96PM5 261 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 METTL9Q9H1A3 318 aa18.88■□□□□ 0.61
FOXA1-204ENST00000554607 CSTBP04080 98 aaKnown RBP18.87■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF429Q86V71 674 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 MYOZ3Q8TDC0 251 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 LGALS12Q96DT0 336 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 PDCD1LG2Q9BQ51 273 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 ISG20L2Q9H9L3 353 aaKnown RBP18.87■□□□□ 0.61
FOXA1-204ENST00000554607 RAB9BQ9NP90 201 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 IL36GQ9NZH8 169 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 ING4Q9UNL4 249 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 ORC6Q9Y5N6 252 aa18.87■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF736B4DX44 427 aaPredicted RBP18.86■□□□□ 0.61
FOXA1-204ENST00000554607 F2RL1P55085 397 aa18.86■□□□□ 0.61
FOXA1-204ENST00000554607 RBM11P57052 281 aaKnown RBP18.86■□□□□ 0.61
FOXA1-204ENST00000554607 RUNX1Q01196 453 aa18.86■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF616Q08AN1 781 aa18.86■□□□□ 0.61
FOXA1-204ENST00000554607 OR51A2Q8NGJ7 313 aa18.86■□□□□ 0.61
FOXA1-204ENST00000554607 OR52N1Q8NH53 320 aa18.86■□□□□ 0.61
FOXA1-204ENST00000554607 PAK1IP1Q9NWT1 392 aaPredicted RBP18.86■□□□□ 0.61
FOXA1-204ENST00000554607 ZNF107Q9UII5 783 aaPredicted RBP18.86■□□□□ 0.61
FOXA1-204ENST00000554607 VSIG4Q9Y279 399 aa18.86■□□□□ 0.61
FOXA1-204ENST00000554607 IGHV3-43A0A0B4J1X8 118 aa18.85■□□□□ 0.61
FOXA1-204ENST00000554607 CDRT1O95170 752 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms