RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 C8orf46Q8TAG6 207 aa9.07□□□□□ -0.96
PABPN1-203ENST00000553960 GAFA1Q96PS6 74 aa9.07□□□□□ -0.96
PABPN1-203ENST00000553960 ZNF701Q9NV72 531 aaPredicted RBP9.07□□□□□ -0.96
PABPN1-203ENST00000553960 EHFQ9NZC4 300 aa9.07□□□□□ -0.96
PABPN1-203ENST00000553960 ZNF230Q9UIE0 474 aaPredicted RBP9.07□□□□□ -0.96
PABPN1-203ENST00000553960 COL12A1Q99715 3063 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 DOCK11Q5JSL3 2073 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 TRBV23-1A0A0A0MS06 115 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 IGKV1-6A0A0C4DH72 117 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 ODAMA1E959 279 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 MEIS3P1A6NDR6 274 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 C15orf65H3BRN8 121 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 SNAPC5O75971 98 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 DUS4LO95620 317 aaKnown RBP9.06□□□□□ -0.96
PABPN1-203ENST00000553960 RBP4P02753 201 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 HPXP02790 462 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 ZBTB25P24278 435 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 GLP1RP43220 463 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 EFNA4P52798 201 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 KIAA2026Q5HYC2 2103 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 SLC38A6Q8IZM9 456 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 ZBTB34Q8NCN2 500 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 NEK7Q8TDX7 302 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 RSRP1Q9BUV0 290 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 CHODLQ9H9P2 273 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 KCNIP1Q9NZI2 227 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 UBE2J1Q9Y385 318 aaPredicted RBP9.06□□□□□ -0.96
PABPN1-203ENST00000553960 OR2W1Q9Y3N9 320 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 LINC00312Q9Y6C7 94 aa9.06□□□□□ -0.96
PABPN1-203ENST00000553960 A0A0A6YYJ9 748 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 OR5H14A6NHG9 310 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 NKX6-3A6NJ46 265 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 DBX1A6NMT0 343 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 SIRPB1O00241 398 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 CREBL2O60519 120 aaPredicted RBP9.05□□□□□ -0.96
PABPN1-203ENST00000553960 OR2A4O95047 310 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 PPYP01298 95 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 PMP2P02689 132 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 GSTT2P0CG29 244 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 RPS2P15880 293 aaKnown RBP9.05□□□□□ -0.96
PABPN1-203ENST00000553960 RCC1P18754 421 aaPredicted RBP9.05□□□□□ -0.96
PABPN1-203ENST00000553960 NPY4RP50391 375 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 TSPAN5P62079 268 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 KRBOX4Q5JUW0 171 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 FAAP20Q6NZ36 180 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 C11orf88Q6PI97 169 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 TCTE3Q8IZS6 198 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 ZNF431Q8TF32 576 aaPredicted RBP9.05□□□□□ -0.96
PABPN1-203ENST00000553960 MITD1Q8WV92 249 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 GALMQ96C23 342 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 AKR1E2Q96JD6 320 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 OR2A7Q96R45 310 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 VRK1Q99986 396 aaPredicted RBP9.05□□□□□ -0.96
PABPN1-203ENST00000553960 RTBDNQ9BSG5 229 aaPredicted RBP9.05□□□□□ -0.96
PABPN1-203ENST00000553960 OR51J1Q9H342 316 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 LIME1Q9H400 295 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 C5orf66Q9H5L9 145 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 TAF9BQ9HBM6 251 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 KIF25Q9UIL4 384 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 JPT1Q9UK76 154 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 VSIG4Q9Y279 399 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 ALG5Q9Y673 324 aa9.05□□□□□ -0.96
PABPN1-203ENST00000553960 ZNF729A6NN14 1252 aaPredicted RBP9.04□□□□□ -0.96
PABPN1-203ENST00000553960 C12orf77C9JDV5 145 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 F5H0A9 414 aaPredicted RBP9.04□□□□□ -0.96
PABPN1-203ENST00000553960 ARPC1BO15143 372 aaKnown RBP9.04□□□□□ -0.96
PABPN1-203ENST00000553960 YPEL1O60688 119 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 CYB5R3P00387 301 aaPredicted RBP9.04□□□□□ -0.96
PABPN1-203ENST00000553960 SCTP09683 121 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 OR4E1P0C645 316 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 SULT1A3P0DMM9 295 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 SULT1A4P0DMN0 295 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 SNTB1Q13884 538 aaKnown RBP9.04□□□□□ -0.96
PABPN1-203ENST00000553960 PDCD1Q15116 288 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 BRICD5Q6PL45 260 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 LYG2Q86SG7 212 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 BVESQ8NE79 360 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 OR10J5Q8NHC4 309 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 ZNF596Q8TC21 504 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 RAB1CQ92928 201 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 KIRREL1Q96J84 757 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 YPEL2Q96QA6 119 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 TMEM246Q9BRR3 403 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 CHMP1AQ9HD42 196 aaPredicted RBP9.04□□□□□ -0.96
PABPN1-203ENST00000553960 MIOXQ9UGB7 285 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 OR14J1Q9UGF5 321 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 TRAPPC2LQ9UL33 140 aa9.04□□□□□ -0.96
PABPN1-203ENST00000553960 MALRD1Q5VYJ5 2156 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 USF3Q68DE3 2245 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 TRAV6A0A075B6T7 132 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 A0A087X0M5 115 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 KBTBD11-OT1A0A1B0GTJ5 212 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 A0A1B0GX30 115 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 hADV38S2A0JD32 116 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 CRYM-AS1A6NIL9 109 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 NDUFS8O00217 210 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 SPINT2O43291 252 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 RNF224P0DH78 156 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms