RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PEA15Q15121 130 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 NMSQ5H8A3 153 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 MEX3BQ6ZN04 569 aaKnown RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF818PQ6ZRF7 136 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 MRPL30Q8TCC3 161 aaKnown RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 SECTM1Q8WVN6 248 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 USB1Q9BQ65 265 aaKnown RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 OR51I2Q9H344 312 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 PLEKHF2Q9H8W4 249 aa11.02□□□□□ -0.65
SHMT2-205ENST00000553474 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-205ENST00000553474 PITX3O75364 302 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 TSPAN9O75954 239 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 ACAA1P09110 424 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-205ENST00000553474 SCTP09683 121 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 SFTA3P0C7M3 94 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 HLA-DRB3P79483 266 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 EWSR1Q01844 656 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF766Q5HY98 468 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-205ENST00000553474 GAPTQ8N292 157 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 OR10J5Q8NHC4 309 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 SMIM3Q9BZL3 60 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 OR2W1Q9Y3N9 320 aa11.01□□□□□ -0.65
SHMT2-205ENST00000553474 A0A1B0GW64 132 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 ATP6V1G2-DDX39BF2Z307 99 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 HSPA12AO43301 675 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 SYNGR1O43759 233 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 SELEP16581 610 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 TUBG1P23258 451 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 SNCAP37840 140 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 ARHGDIBP52566 201 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 B2MP61769 119 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 ARG2P78540 354 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 ID3Q02535 119 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 GABRA6Q16445 453 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 ATP1A1-AS1Q5TC04 95 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 PCSK4Q6UW60 755 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 UNQ6494/PRO21346Q6UXR6 183 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 AKR1E2Q96JD6 320 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 PBDC1Q9BVG4 233 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 TUBG2Q9NRH3 451 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 CACFD1Q9UGQ2 172 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 PRSS50Q9UI38 385 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 ZDHHC8Q9ULC8 765 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 URB1O60287 2271 aaKnown RBP11□□□□□ -0.65
SHMT2-205ENST00000553474 NKX2-6A6NCS4 301 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 FAM157AC9JC47 383 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 SIGLEC5O15389 551 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 F2RP25116 425 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 LMO1P25800 156 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 CD80P33681 288 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 CAMLGP49069 296 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 VAMP2P63027 116 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 HFEQ30201 348 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 MDP1Q86V88 176 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 H1FOOQ8IZA3 346 aaPredicted RBP11□□□□□ -0.65
SHMT2-205ENST00000553474 HIPK2Q9H2X6 1198 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 CRIM1Q9NZV1 1036 aa11□□□□□ -0.65
SHMT2-205ENST00000553474 ANKRD11Q6UB99 2663 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-205ENST00000553474 TRAV24A0A0B4J272 114 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 IGKV1-6A0A0C4DH72 117 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 A0A1B0GU03 582 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 BTBD17A6NE02 478 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 TMEM210A6NLX4 147 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 IGHG3P01860 377 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 RAC2P15153 192 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF14P17017 642 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-205ENST00000553474 NHLH2Q02577 135 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 TSC22D1Q15714 1073 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 HIKESHIQ53FT3 197 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF324BQ6AW86 544 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-205ENST00000553474 ZCCHC14Q8WYQ9 949 aaKnown RBP10.99□□□□□ -0.65
SHMT2-205ENST00000553474 GNPNAT1Q96EK6 184 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-205ENST00000553474 TMEM231Q9H6L2 316 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 WFDC1Q9HC57 220 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 C19orf12Q9NSK7 152 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 RAXQ9Y2V3 346 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 PRELID3BQ9Y3B1 194 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 FAM96BQ9Y3D0 163 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 LIPGQ9Y5X9 500 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 ESPL1Q14674 2120 aa10.99□□□□□ -0.65
SHMT2-205ENST00000553474 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-205ENST00000553474 OR8U9P0C7N5 309 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 GLI4P10075 376 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 WT1P19544 449 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-205ENST00000553474 CD200P41217 278 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 UBE2NP61088 152 aaKnown RBP10.98□□□□□ -0.65
SHMT2-205ENST00000553474 ERVK11-1P61568 191 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 MIDNQ504T8 468 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 INO80CQ6PI98 192 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-205ENST00000553474 OR8U1Q8NH10 309 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 LSM10Q969L4 123 aaKnown RBP10.98□□□□□ -0.65
SHMT2-205ENST00000553474 HS3ST6Q96QI5 342 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 C12orf49Q9H741 205 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 CCL28Q9NRJ3 127 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 SPRR3Q9UBC9 169 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms