RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TRUB1Q8WWH5 349 aaKnown RBP7.85□□□□□ -1.15
ACTN1-208ENST00000553370 CENPNQ96H22 339 aaPredicted RBP7.85□□□□□ -1.15
ACTN1-208ENST00000553370 DUX3Q96PT4 197 aa7.85□□□□□ -1.15
ACTN1-208ENST00000553370 ALG8Q9BVK2 526 aa7.85□□□□□ -1.15
ACTN1-208ENST00000553370 A0A087X0M5 115 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 A0A1B0GX30 115 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 A0A1W2PPE3 182 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 A0A1W2PPI3 338 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 TMEM212A6NML5 194 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 AP4M1O00189 453 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 SDCBPO00560 298 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-208ENST00000553370 OR7C1O76099 320 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-208ENST00000553370 LY86O95711 162 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 CSTBP04080 98 aaKnown RBP7.84□□□□□ -1.15
ACTN1-208ENST00000553370 CD2P06729 351 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 REG1BP48304 166 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 KCNJ3P48549 501 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 GBX2P52951 348 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-208ENST00000553370 ISL1P61371 349 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 PPP3R1P63098 170 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 C17orf58Q2M2W7 97 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 PIGYQ3MUY2 71 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 ZIK1Q3SY52 487 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-208ENST00000553370 KLHL22Q53GT1 634 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 TEX38Q6PEX7 206 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 ETV3LQ6ZN32 361 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 LHFPL3Q86UP9 236 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 STPG2Q8N412 459 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 OR5M8Q8NGP6 311 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 OR10K1Q8NGX5 313 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 OR8U1Q8NH10 309 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 CNIH3Q8TBE1 160 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 SLC7A6OSQ96CW6 309 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-208ENST00000553370 PELI1Q96FA3 418 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 RASL11BQ9BPW5 248 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 OSBPL10Q9BXB5 764 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 PSG11Q9UQ72 335 aa7.84□□□□□ -1.15
ACTN1-208ENST00000553370 IGHV3-72A0A0B4J1Y9 119 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 TRAV39A0A0B4J263 110 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 TMEM30CPA0ZSE6 113 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 OR4C45A6NMZ5 311 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 H0YHG0 523 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 CCL24O00175 119 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 MPZL2O60487 215 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 RAMP3O60896 148 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 FADS2O95864 444 aaKnown RBP7.83□□□□□ -1.16
ACTN1-208ENST00000553370 GAPDHP04406 335 aaKnown RBP7.83□□□□□ -1.16
ACTN1-208ENST00000553370 VDAC1P21796 283 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 SOX2P48431 317 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 LUMP51884 338 aaPredicted RBP7.83□□□□□ -1.16
ACTN1-208ENST00000553370 MRPL28Q13084 256 aaKnown RBP7.83□□□□□ -1.16
ACTN1-208ENST00000553370 GPR50Q13585 617 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 IL13RA2Q14627 380 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 DEFB136Q30KP8 78 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 ATAD3CQ5T2N8 411 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 C18orf65Q6ZTR6 163 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 Q8N1Y9 231 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 STX19Q8N4C7 294 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 OR10A7Q8NGE5 316 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 OR2T10Q8NGZ9 312 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 DPCDQ9BVM2 203 aaPredicted RBP7.83□□□□□ -1.16
ACTN1-208ENST00000553370 METTL9Q9H1A3 318 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 RAB9BQ9NP90 201 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 ING4Q9UNL4 249 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 GMPPBQ9Y5P6 360 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 U3KQK5 164 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 X6R8D5 127 aa7.83□□□□□ -1.16
ACTN1-208ENST00000553370 KMT2CQ8NEZ4 4911 aaKnown RBP7.83□□□□□ -1.16
ACTN1-208ENST00000553370 TRAV24A0A0B4J272 114 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 IGHV1-3A0A0C4DH29 117 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 SEC14L6B5MCN3 397 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 GABRPO00591 440 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 EI24O14681 340 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 ATP5HO75947 161 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 NHLRC4P0CG21 123 aaPredicted RBP7.82□□□□□ -1.16
ACTN1-208ENST00000553370 SERPINA2P20848 420 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 GPR12P47775 334 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 ZP1P60852 638 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 DIAPH2-AS1Q14236 149 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 GALEQ14376 348 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 CDK5R1Q15078 307 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 PNLIPRP3Q17RR3 467 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 UTF1Q5T230 341 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 SLC16A12Q6ZSM3 486 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 LCNL1Q6ZST4 164 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 SUMF2Q8NBJ7 301 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 PXT1Q8NFP0 134 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 UBALD1Q8TB05 177 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 PLPPR1Q8TBJ4 325 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 CCDC107Q8WV48 283 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 ARL11Q969Q4 196 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 LGALS12Q96DT0 336 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 RAX2Q96IS3 184 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 Q96MT0 163 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 PRR25Q96S07 402 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 PDCD1LG2Q9BQ51 273 aa7.82□□□□□ -1.16
ACTN1-208ENST00000553370 PAK1IP1Q9NWT1 392 aaPredicted RBP7.82□□□□□ -1.16
ACTN1-208ENST00000553370 TAS2R4Q9NYW5 299 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms