RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 PAX5Q02548 391 aa13.09□□□□□ -0.31
XRCC3-204ENST00000553361 SLC22A6Q4U2R8 563 aa13.09□□□□□ -0.31
XRCC3-204ENST00000553361 DEFB121Q5J5C9 76 aa13.09□□□□□ -0.31
XRCC3-204ENST00000553361 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
XRCC3-204ENST00000553361 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
XRCC3-204ENST00000553361 SMPD3Q9NY59 655 aaPredicted RBP13.09□□□□□ -0.31
XRCC3-204ENST00000553361 IL36GQ9NZH8 169 aa13.09□□□□□ -0.31
XRCC3-204ENST00000553361 K7EIL1 84 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 CCRL2O00421 344 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 OGG1O15527 345 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 MYL12AP19105 171 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 HOXD3P31249 432 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-204ENST00000553361 RIPK1Q13546 671 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 NHLRC3Q5JS37 347 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 FAM53AQ6NSI3 398 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-204ENST00000553361 ZFP41Q8N8Y5 198 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 CHPT1Q8WUD6 406 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 GHSRQ92847 366 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 IFT22Q9H7X7 185 aa13.08□□□□□ -0.32
XRCC3-204ENST00000553361 PAK1IP1Q9NWT1 392 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-204ENST00000553361 IGHV3-43A0A0B4J1X8 118 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 IGHV1-3A0A0C4DH29 117 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 A0A1W2PPK0 400 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 NCBP2LA6PVI3 153 aaKnown RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 NUDT19A8MXV4 375 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 C15orf65H3BRN8 121 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 SDCBPO00560 298 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 HSD17B6O14756 317 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 FGF16O43320 207 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 DUS4LO95620 317 aaKnown RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 LALBAP00709 142 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 GAPDHP04406 335 aaKnown RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 IGHV3-43DP0DP04 118 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 GTF2F2P13984 249 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 RPL23AP62750 156 aaKnown RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 SLC35E3Q7Z769 313 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 MRPL41Q8IXM3 137 aaKnown RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 LINC00482Q8N8I6 264 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 OR51D1Q8NGF3 324 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 SMIM19Q96E16 107 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 ZNF184Q99676 751 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 CHCHD3Q9NX63 227 aaKnown RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 EXOSC1Q9Y3B2 195 aaKnown RBP13.07□□□□□ -0.32
XRCC3-204ENST00000553361 DNAH9Q9NYC9 4486 aa13.07□□□□□ -0.32
XRCC3-204ENST00000553361 WI2-2373I1.2A0A1W2PRP0 233 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 IRGMA1A4Y4 181 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 MAGEA13PA6NCF6 341 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 LINC01548A6NM66 108 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 ZNF780AO75290 641 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-204ENST00000553361 MT-ND4P03905 459 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 IGFBP3P17936 291 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-204ENST00000553361 ZNF816Q0VGE8 651 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-204ENST00000553361 MPV17LQ2QL34 196 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 C8orf86Q6ZUL3 223 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 OR2W3Q7Z3T1 314 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 LINC00596Q86U02 117 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 CYGBQ8WWM9 190 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 EAF1Q96JC9 268 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-204ENST00000553361 RDH12Q96NR8 316 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 GFOD1Q9NXC2 390 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 CKLFQ9UBR5 152 aa13.06□□□□□ -0.32
XRCC3-204ENST00000553361 DIMT1Q9UNQ2 313 aaKnown RBP13.06□□□□□ -0.32
XRCC3-204ENST00000553361 TRAV8-7A0A075B6U6 113 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 TRBV5-5A0A0J9YX44 114 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 AIPO00170 330 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 IGHG2P01859 326 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 THBS3P49746 956 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 SLC35B1P78383 322 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 LRRC36Q1X8D7 754 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 Q499Y3 187 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 DMKNQ6E0U4 476 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-204ENST00000553361 ETV3LQ6ZN32 361 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 ZNF497Q6ZNH5 498 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 FOXRED2Q8IWF2 684 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 STX19Q8N4C7 294 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 JAGN1Q8N5M9 183 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 OR52M1Q8NGK5 317 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 MUL1Q969V5 352 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 ZFP57Q9NU63 452 aa13.05□□□□□ -0.32
XRCC3-204ENST00000553361 PNMA8CA0A1B0GUJ8 204 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 ORC5O43913 435 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 IL3RAP26951 378 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 RPS11P62280 158 aaKnown RBP eCLIP13.04□□□□□ -0.32
XRCC3-204ENST00000553361 MED21Q13503 144 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 EBI3Q14213 229 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 GPR176Q14439 515 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 YIF1BQ5BJH7 314 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 SYT6Q5T7P8 510 aaPredicted RBP13.04□□□□□ -0.32
XRCC3-204ENST00000553361 GLIPR1L1Q6UWM5 242 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 STPG2Q8N412 459 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 LINC00311Q8N616 119 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 KLHL30-AS1Q8NEE0 82 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 OR2T10Q8NGZ9 312 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 RBMXL1Q96E39 390 aaKnown RBP13.04□□□□□ -0.32
XRCC3-204ENST00000553361 ETAA1Q9NY74 926 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 TRAPPC2LQ9UL33 140 aa13.04□□□□□ -0.32
XRCC3-204ENST00000553361 MRPS28Q9Y2Q9 187 aaKnown RBP13.04□□□□□ -0.32
XRCC3-204ENST00000553361 ZNF736B4DX44 427 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms