RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 DAD1P61803 113 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 ELP2Q6IA86 826 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 PRSS54Q6PEW0 395 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 FAM19A3Q7Z5A8 133 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 COMMD7Q86VX2 200 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 OR2K2Q8NGT1 345 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 OR10D3Q8NH80 312 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 TNFAIP8L1Q8WVP5 186 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 OPTNQ96CV9 577 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 TMEM38BQ9NVV0 291 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 ANAPC11Q9NYG5 84 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 RFNGQ9Y644 331 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 ADAMTS9Q9P2N4 1935 aa3.68□□□□□ -1.82
SCFD1-208ENST00000553278 BAZ2AQ9UIF9 1905 aaKnown RBP3.68□□□□□ -1.82
SCFD1-208ENST00000553278 TEX50A0A1B0GTY4 177 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 RBBP9O75884 186 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 MYL12AP19105 171 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 IDH2P48735 452 aaKnown RBP3.67□□□□□ -1.82
SCFD1-208ENST00000553278 INPP1P49441 399 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 MRPS25P82663 173 aaKnown RBP3.67□□□□□ -1.82
SCFD1-208ENST00000553278 FMODQ06828 376 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 CDC20Q12834 499 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 SP6Q3SY56 376 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 FAM104BQ5XKR9 115 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 RASSF6Q6ZTQ3 369 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 TRAPPC5Q8IUR0 188 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 NATD1Q8N6N6 113 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 ANP32BQ92688 251 aaKnown RBP3.67□□□□□ -1.82
SCFD1-208ENST00000553278 TMBIM1Q969X1 311 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 SLC22A13Q9Y226 551 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 ALG5Q9Y673 324 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 ATRNO75882 1429 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 SVILO95425 2214 aa3.67□□□□□ -1.82
SCFD1-208ENST00000553278 DNMT1P26358 1616 aaKnown RBP3.66□□□□□ -1.82
SCFD1-208ENST00000553278 IGLV3-16A0A075B6K0 115 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 IGHV1-45A0A0A0MS14 117 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 MFNGO00587 321 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 COPEO14579 308 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 BET1O15155 118 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 POP7O75817 140 aaKnown RBP3.66□□□□□ -1.82
SCFD1-208ENST00000553278 IFNA6P05013 189 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 CTSEP14091 401 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 CNTFRP26992 372 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 SLC35A2P78381 396 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 PDK2Q15119 407 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 CLVS2Q5SYC1 327 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 SPOPLQ6IQ16 392 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 MARCH3Q86UD3 253 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 SLC51BQ86UW2 128 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 ZBTB8OSQ8IWT0 167 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 SLC35G3Q8N808 338 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 C16orf78Q8WTQ4 265 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 ITLN2Q8WWU7 325 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-208ENST00000553278 TLCD1Q96CP7 247 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 PEBP4Q96S96 227 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 NYAP2Q9P242 653 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 POLR1DQ9Y2S0 133 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 EVC2Q86UK5 1308 aa3.66□□□□□ -1.82
SCFD1-208ENST00000553278 A0A1W2PQL4 384 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-208ENST00000553278 BTNL10A8MVZ5 291 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 IFNA16P05015 189 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 IL4P05112 153 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 CRYBA1P05813 215 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 HIST1H1EP10412 219 aaKnown RBP3.65□□□□□ -1.83
SCFD1-208ENST00000553278 GABRA1P14867 456 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 NTF3P20783 257 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 NPY1RP25929 384 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 OMPP47874 163 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 TCL1AP56279 114 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 CXCR4P61073 352 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 TMEM176BQ3YBM2 270 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-208ENST00000553278 AKIRIN2Q53H80 203 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 SYPL2Q5VXT5 272 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 FAM71E1Q6IPT2 247 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 ZNRF2Q8NHG8 242 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 MFSD8Q8NHS3 518 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 GALMQ96C23 342 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 ZNF717Q9BY31 904 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-208ENST00000553278 EIF5A2Q9GZV4 153 aaKnown RBP3.65□□□□□ -1.83
SCFD1-208ENST00000553278 SLC2A9Q9NRM0 540 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 IL37Q9NZH6 218 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 SLC22A7Q9Y694 548 aa3.65□□□□□ -1.83
SCFD1-208ENST00000553278 ISLRO14498 428 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 CDRT1O95170 752 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 NRASP01111 189 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 HRASP01112 189 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 KRASP01116 189 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 IGHV1-46P01743 117 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 HLA-DRAP01903 254 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 IL6P05231 212 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 ATP5G1P05496 136 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 IL3P08700 152 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 OR5AC1P0C628 307 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 CXCL3P19876 107 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 S100A2P29034 98 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 NOVP48745 357 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 ZNF816Q0VGE8 651 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-208ENST00000553278 EBPQ15125 230 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms