RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 SAP18O00422 153 aaKnown RBP4.79□□□□□ -1.64
VPS29-210ENST00000552130 ZNF780AO75290 641 aaPredicted RBP4.79□□□□□ -1.64
VPS29-210ENST00000552130 PSMD8P48556 350 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 SLC25A1P53007 311 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 TAS2R19P59542 299 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 DNAJB13P59910 316 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 RPS24P62847 133 aaKnown RBP4.79□□□□□ -1.64
VPS29-210ENST00000552130 PAX8Q06710 450 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 PNOCQ13519 176 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 JOSD1Q15040 202 aaPredicted RBP4.79□□□□□ -1.64
VPS29-210ENST00000552130 PAFAH1B3Q15102 231 aaKnown RBP4.79□□□□□ -1.64
VPS29-210ENST00000552130 TGIF1Q15583 401 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 PLPPR5Q32ZL2 321 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 C6orf99Q4VX62 202 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 OR2B11Q5JQS5 317 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 TCF24Q7RTU0 167 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 UMODL1-AS1Q8N2C9 162 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 CIARTQ8N365 385 aaPredicted RBP4.79□□□□□ -1.64
VPS29-210ENST00000552130 DEFB125Q8N687 156 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 OR11H6Q8NGC7 330 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 GNPDA2Q8TDQ7 276 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 RXFP4Q8TDU9 374 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 ZNF501Q96CX3 271 aaPredicted RBP4.79□□□□□ -1.64
VPS29-210ENST00000552130 SIGLEC12Q96PQ1 595 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 C19orf24Q9BVV8 132 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 SFXN3Q9BWM7 321 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 AIG1Q9NVV5 245 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 COPZ2Q9P299 210 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 PTPRGP23470 1445 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 KIF1BO60333 1816 aa4.79□□□□□ -1.64
VPS29-210ENST00000552130 KIF15Q9NS87 1388 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 MYH3P11055 1940 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 MYH15Q9Y2K3 1946 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 DYSFO75923 2080 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 GRIN2BQ13224 1484 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 CIB4A0PJX0 185 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 TRAPPC13A5PLN9 417 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 ZNF850A8MQ14 1090 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 MPTX1A8MV57 137 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 COPEO14579 308 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 FFAR1O14842 300 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 TBL1XO60907 577 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 CCNE2O96020 404 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 C1QCP02747 245 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 HTR1AP08908 422 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 FBP1P09467 338 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 IGHV3-43DP0DP04 118 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 FGF6P10767 208 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 FOLR2P14207 255 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 LMO2P25791 158 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 APLNRP35414 380 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 GFERP55789 205 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 HLA-DRB3P79483 266 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 C16orf72Q14CZ0 275 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 TMEM252Q8N6L7 170 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 AQP11Q8NBQ7 271 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 OR4D11Q8NGI4 311 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 OR10G4Q8NGN3 311 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 OR4S2Q8NH73 311 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 OR10G6Q8NH81 332 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 VN1R17PQ8TDU5 208 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 C1orf54Q8WWF1 131 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 ZBP1Q9H171 429 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 ZDHHC11Q9H8X9 412 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 MED29Q9NX70 200 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 RBM12B-AS1Q9P1G2 102 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 SSR3Q9UNL2 185 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 HEBP2Q9Y5Z4 205 aa4.78□□□□□ -1.64
VPS29-210ENST00000552130 IGLV4-3A0A075B6K6 122 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 TRAV8-3A0A0A6YYJ7 113 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 IGHV3-16A0A0C4DH30 117 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 WI2-2373I1.2A0A1W2PRP0 233 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 TRAPPC2LH3BP13 241 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 K7EPK0 472 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 CYB5BO43169 146 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 CHST10O43529 356 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 ZNF207O43670 478 aaKnown RBP4.77□□□□□ -1.65
VPS29-210ENST00000552130 CDRT1O95170 752 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 GADD45GO95257 159 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 CRYBA1P05813 215 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 RBP1P09455 135 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 CECR9P0C854 216 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 CTLA4P16410 223 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 SPI1P17947 270 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 CDK2P24941 298 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 NUDT1P36639 197 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 SERPINB10P48595 397 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 FABP5Q01469 135 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 REG3AQ06141 175 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 MPPED2Q15777 294 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 ATP6AP1LQ52LC2 224 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 C1orf194Q5T5A4 169 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 C9orf64Q5T6V5 341 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 FAM222AQ5U5X8 452 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 LCN8Q6JVE9 175 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 ZNF493Q6ZR52 646 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 LRRC28Q86X40 367 aaPredicted RBP4.77□□□□□ -1.65
VPS29-210ENST00000552130 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
VPS29-210ENST00000552130 LINC00337Q8N6G1 96 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms