RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 A0A1W2PPE3 182 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 ZNF736B4DX44 427 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-222ENST00000551425 H0Y980 276 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 H3BNX3 289 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 ATP6V0E1O15342 81 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 KDM4BO94953 1096 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 IGKV1D-12P01611 117 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 HSPB1P04792 205 aaKnown RBP9.11□□□□□ -0.95
PTCH1-222ENST00000551425 HMGN1P05114 100 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 MRPL3P09001 348 aaKnown RBP9.11□□□□□ -0.95
PTCH1-222ENST00000551425 FSTP19883 344 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 PDZK1IP1Q13113 114 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 APOFQ13790 326 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 LTC4SQ16873 150 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 GTSCR1Q86UQ5 136 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 YIPF7Q8N8F6 280 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 CCDC54Q8NEL0 328 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 RFESDQ8TAC1 157 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 C10orf35Q96D05 121 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 NRBF2Q96F24 287 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 CENPNQ96H22 339 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-222ENST00000551425 APOL4Q9BPW4 351 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 RSRP1Q9BUV0 290 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 ZCCHC4Q9H5U6 513 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 RHOFQ9HBH0 211 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 KIF25Q9UIL4 384 aa9.11□□□□□ -0.95
PTCH1-222ENST00000551425 MEIKINA0A087WXM9 373 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 IGKV1-9A0A0C4DH69 117 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 DEGS1O15121 323 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 SYT7O43581 403 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 RGS11O94810 467 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 BRI3O95415 125 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 BAG2O95816 211 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 MTCP1P56278 107 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 PAX5Q02548 391 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 GINS1Q14691 196 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 ZNF322Q6U7Q0 402 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-222ENST00000551425 PLEKHG7Q6ZR37 379 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 AMIGO2Q86SJ2 522 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 LINC00311Q8N616 119 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 C8orf31Q8N9H6 132 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 GIPC3Q8TF64 312 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 PP6455Q8WZ26 134 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 TMEM106AQ96A25 262 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 MBOAT4Q96T53 435 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
PTCH1-222ENST00000551425 SHISA3A0PJX4 238 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 CCDC182A6NF36 153 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 G3V2T6 193 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 MAGEB4O15481 346 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-222ENST00000551425 SOX15O60248 233 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 SLC2A2P11168 524 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-222ENST00000551425 PRKACBP22694 351 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 SSTR5P35346 364 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 RAB40BQ12829 278 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 CDK5R1Q15078 307 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 C19orf54Q5BKX5 351 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 ZDHHC13Q8IUH4 622 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 PQLC1Q8N2U9 271 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 OR10G2Q8NGC3 310 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 MRGPRDQ8TDS7 321 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 BARHL1Q9BZE3 327 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 PARP11Q9NR21 331 aa9.09□□□□□ -0.95
PTCH1-222ENST00000551425 IGHV7-81A0A0B4J1V7 117 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 CXorf65A6NEN9 183 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 TXNL1O43396 289 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 DEDDO75618 318 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 ANXA8P13928 327 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 IL3RAP26951 378 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 VHLP40337 213 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 CXCR4P61073 352 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 CDK5Q00535 292 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 RCN1Q15293 331 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 ODF4Q2M2E3 257 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 TMEM179BQ7Z7N9 219 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 SAXO1Q8IYX7 474 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 OR52M1Q8NGK5 317 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 CNN2Q99439 309 aaKnown RBP9.08□□□□□ -0.96
PTCH1-222ENST00000551425 FEVQ99581 238 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 ZNF556Q9HAH1 456 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 SLC25A19Q9HC21 320 aa9.08□□□□□ -0.96
PTCH1-222ENST00000551425 SNRPBP14678 240 aaKnown RBP9.07□□□□□ -0.96
PTCH1-222ENST00000551425 ATF1P18846 271 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 BLVRBP30043 206 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-222ENST00000551425 ZNF137PP52743 207 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 CRIP2P52943 208 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-222ENST00000551425 MMDQ15546 238 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 RSBN1Q5VWQ0 802 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-222ENST00000551425 CEMP1Q6PRD7 247 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-222ENST00000551425 IL34Q6ZMJ4 242 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 UTS2BQ765I0 119 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 SPSB1Q96BD6 273 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 SPACA5Q96QH8 159 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 ADI1Q9BV57 179 aa9.07□□□□□ -0.96
PTCH1-222ENST00000551425 FOXA2Q9Y261 457 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-222ENST00000551425 RRP15Q9Y3B9 282 aaKnown RBP9.07□□□□□ -0.96
PTCH1-222ENST00000551425 TRAV24A0A0B4J272 114 aa9.06□□□□□ -0.96
PTCH1-222ENST00000551425 A0A1W2PN81 502 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms