RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 OR8H1Q8NGG4 311 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 OR5M8Q8NGP6 311 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 TSEN15Q8WW01 171 aaKnown RBP10.1□□□□□ -0.79
PTCH1-221ENST00000550914 TFAP2CQ92754 450 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 GPER1Q99527 375 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 PDCD1LG2Q9BQ51 273 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 DCLRE1BQ9H816 532 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 ISG20L2Q9H9L3 353 aaKnown RBP10.1□□□□□ -0.79
PTCH1-221ENST00000550914 ZNF580Q9UK33 172 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 LSM4Q9Y4Z0 139 aaKnown RBP10.1□□□□□ -0.79
PTCH1-221ENST00000550914 SIRT4Q9Y6E7 314 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-221ENST00000550914 U3KQK5 164 aa10.1□□□□□ -0.79
PTCH1-221ENST00000550914 TMEM30CPA0ZSE6 113 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 NCBP2LA6PVI3 153 aaKnown RBP10.09□□□□□ -0.79
PTCH1-221ENST00000550914 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
PTCH1-221ENST00000550914 RPLP1P05386 114 aaKnown RBP10.09□□□□□ -0.79
PTCH1-221ENST00000550914 GABRB1P18505 474 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 IL3RAP26951 378 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 ALDH3A2P51648 485 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 GBX2P52951 348 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-221ENST00000550914 RAB40BQ12829 278 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 GPR50Q13585 617 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 LTC4SQ16873 150 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 LPCAT4Q643R3 524 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 MOB3BQ86TA1 216 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 SATL1Q86VE3 508 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 Q8N9W7 124 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 ST6GALNAC6Q969X2 333 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 Q96MT0 163 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 PAK1IP1Q9NWT1 392 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-221ENST00000550914 ERVK13-1Q9NX77 482 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 ST3GAL6Q9Y274 331 aa10.09□□□□□ -0.79
PTCH1-221ENST00000550914 E9PI62 339 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 C15orf65H3BRN8 121 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 EI24O14681 340 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 TXNL1O43396 289 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 ORC5O43913 435 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 OR7C1O76099 320 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-221ENST00000550914 MOSP00540 346 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 CD2P06729 351 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 RBM11P57052 281 aaKnown RBP10.08□□□□□ -0.8
PTCH1-221ENST00000550914 RAB25P57735 213 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 MPV17LQ2QL34 196 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 TMEM104Q8NE00 496 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 OR51A2Q8NGJ7 313 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 OR10K1Q8NGX5 313 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 OR52N1Q8NH53 320 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-221ENST00000550914 ARL11Q969Q4 196 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 DUX3Q96PT4 197 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 CHCHD6Q9BRQ6 235 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 JAM3Q9BX67 310 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 FAM192AQ9GZU8 254 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 METTL9Q9H1A3 318 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 RAB9BQ9NP90 201 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 PLSCR3Q9NRY6 295 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 MRPS18AQ9NVS2 196 aaKnown RBP10.08□□□□□ -0.8
PTCH1-221ENST00000550914 GFOD1Q9NXC2 390 aa10.08□□□□□ -0.8
PTCH1-221ENST00000550914 IGHV3-72A0A0B4J1Y9 119 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 TRAV39A0A0B4J263 110 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 A0A1W2PPE3 182 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 SDCBPO00560 298 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF780AO75290 641 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-221ENST00000550914 CIB2O75838 187 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 HTR3BO95264 441 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 IGHG4P01861 327 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 IGF1P05019 195 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 REG1BP48304 166 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 LUMP51884 338 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF137PP52743 207 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 CFHR3Q02985 330 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 FHL3Q13643 280 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 TMEM30BQ3MIR4 351 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 ZIK1Q3SY52 487 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-221ENST00000550914 CCDC58Q4VC31 144 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 FAM71E2Q8N5Q1 922 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 RHOXF1Q8NHV9 184 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 GPR148Q8TDV2 347 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 S1PR3Q99500 378 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 RASL11BQ9BPW5 248 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 TMEM138Q9NPI0 162 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 TAS2R4Q9NYW5 299 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 GMPPBQ9Y5P6 360 aa10.07□□□□□ -0.8
PTCH1-221ENST00000550914 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 GEMIN2O14893 280 aaKnown RBP10.06□□□□□ -0.8
PTCH1-221ENST00000550914 CDRT1O95170 752 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 CSTBP04080 98 aaKnown RBP10.06□□□□□ -0.8
PTCH1-221ENST00000550914 OR5H8P0DN80 308 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF93P35789 620 aaPredicted RBP10.06□□□□□ -0.8
PTCH1-221ENST00000550914 DEFB136Q30KP8 78 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 NKAPLQ5M9Q1 402 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 RPL22L1Q6P5R6 122 aaKnown RBP10.06□□□□□ -0.8
PTCH1-221ENST00000550914 ZNF497Q6ZNH5 498 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 SLC25A48Q6ZT89 311 aaKnown RBP10.06□□□□□ -0.8
PTCH1-221ENST00000550914 MYOZ3Q8TDC0 251 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 PYDC1Q8WXC3 89 aa10.06□□□□□ -0.8
PTCH1-221ENST00000550914 RGP1Q92546 391 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms