RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 HES4Q9HCC6 221 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ABCB9Q9NP78 766 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ABCB10Q9NRK6 738 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 CENPMQ9NSP4 180 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 ZFP57Q9NU63 452 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 COMMD3-BMI1R4GMX3 469 aa2.76□□□□□ -1.97
LIMA1-206ENST00000550611 IGHV2-26A0A0B4J1V2 119 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ANXA2P2A6NMY6 339 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 BBIP1A8MTZ0 92 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF732B4DXR9 585 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 LY6LH3BQJ8 138 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 CXCR6O00574 342 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 MRASO14807 208 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF737O75373 536 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 OR2F2O95006 317 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 SERPINA1P01009 418 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 IGLV1-47P01700 117 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 IGLV3-1P01715 115 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 APOC1P02654 83 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 SEMG1P04279 462 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 PGA5P0DJD9 388 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 CD24P25063 80 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 FMO3P31513 532 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 GLIPR1P48060 266 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 CX3CR1P49238 355 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 GPM6AP51674 278 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 SLC7A2P52569 658 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 OR12D2P58182 307 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF121P58317 390 aaPredicted RBP2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ERVK11-1P61568 191 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 GNG3P63215 75 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 BDH1Q02338 343 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 MEF2CQ06413 473 aaPredicted RBP2.75□□□□□ -1.97
LIMA1-206ENST00000550611 SLC34A1Q06495 639 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 TSPAN31Q12999 210 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 UBE2V1Q13404 147 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 KIR2DS1Q14954 304 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 TAF13Q15543 124 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 C9orf152Q5JTZ5 239 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 CYP4Z1Q86W10 505 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 TIGD4Q8IY51 512 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 FTMTQ8N4E7 242 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 SLC37A3Q8NCC5 494 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 Q8NFD4 153 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 PROKR2Q8NFJ6 384 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 OR5A2Q8NGI9 324 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 OR51L1Q8NGJ5 315 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 OR4P4Q8NGL7 312 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 OR2T4Q8NH00 348 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 FANK1Q8TC84 345 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 PIGCQ92535 297 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF488Q96MN9 340 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 AMELYQ99218 206 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 NRIP2Q9BQI9 281 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF649Q9BS31 505 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 ABHD6Q9BV23 337 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 MAGIXQ9H6Y5 334 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 EDA2RQ9HAV5 297 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 SAR1AQ9NR31 198 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 GID8Q9NWU2 228 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 DPM3Q9P2X0 92 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 LAMP5Q9UJQ1 280 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 AP3M1Q9Y2T2 418 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 HILPDAQ9Y5L2 63 aa2.75□□□□□ -1.97
LIMA1-206ENST00000550611 A0A0U1RQV5 110 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 PSMB11A5LHX3 300 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ACOD1A6NK06 481 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 OR5B21A6NL26 309 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 J3QR06 171 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 M0QZK8 103 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CCL24O00175 119 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SLC1A7O00341 560 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 UBE2CO00762 179 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SLC22A2O15244 555 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 EDF1O60869 148 aaKnown RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 MMP23AO75900 390 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 KDM4BO94953 1096 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 DIRAS1O95057 198 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 LY6G6CO95867 125 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 IGHG2P01859 326 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 GYPBP06028 91 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CLUP10909 449 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ATP6V1B1P15313 513 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SPI1P17947 270 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 MPZP25189 248 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 HTR1DP28221 377 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CD34P28906 385 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 OR3A4PP47883 348 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ETV1P50549 477 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 LUMP51884 338 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CAPZA1P52907 286 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 PPP5CP53041 499 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SMIM11AP58511 58 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SEC61BP60468 96 aaKnown RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SNRPEP62304 92 aaKnown RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ACTA2P62736 377 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ACTG2P63267 376 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ACTC1P68032 377 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ACTA1P68133 377 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 RELQ04864 619 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms