RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GLSO94925 669 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-205ENST00000550592 CD74P04233 296 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF688P0C7X2 276 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 CD37P11049 281 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 GZMAP12544 262 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 GFAPP14136 432 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 SRMP19623 302 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 NPY1RP25929 384 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 POLR2IP36954 125 aaKnown RBP2.82□□□□□ -1.96
LIMA1-205ENST00000550592 TALDO1P37837 337 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 PMELP40967 661 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 CAPZBP47756 277 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 NDUFA8P51970 172 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 AP1S2P56377 157 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 MLF1P58340 268 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 TAS2R31P59538 309 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 ZFP1Q6P2D0 407 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 SHISA6Q6ZSJ9 500 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 LINC01560Q8TB33 94 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 ANKRD7Q92527 254 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF75CPQ92670 426 aaPredicted RBP2.82□□□□□ -1.96
LIMA1-205ENST00000550592 RNASE6Q93091 150 aaKnown RBP2.82□□□□□ -1.96
LIMA1-205ENST00000550592 PPP1R14BQ96C90 147 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 CERS2Q96G23 380 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 RNF157Q96PX1 679 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 OR2M4Q96R27 311 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 RBBP8Q99708 897 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 RNF5Q99942 180 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 GGTLC1Q9BX51 225 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 ULBP1Q9BZM6 244 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 TSGA10Q9BZW7 698 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 TOLLIPQ9H0E2 274 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 VWFP04275 2813 aa2.82□□□□□ -1.96
LIMA1-205ENST00000550592 TRAV6A0A075B6T7 132 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 ARPC4-TTLL3A0A0A6YYG9 625 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 M0QX08 132 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 ATP8B1O43520 1251 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 MPDU1O75352 247 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 HSBP1O75506 76 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 CCNKO75909 580 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 MPZL1O95297 269 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 YEATS4O95619 227 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 ASS1P00966 412 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 S100A6P06703 90 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 RHOCP08134 193 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 BMI1P35226 326 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 TAS2R46P59540 309 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 CACNG7P62955 275 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 DCDP81605 110 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 DR1Q01658 176 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 DYNC1I2Q13409 638 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 PNOCQ13519 176 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 RBMY1FQ15415 496 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 HADHQ16836 314 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 PYCR3Q53H96 274 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 RNASE13Q5GAN3 156 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 THOC7Q6I9Y2 204 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 LINC00336Q6ZUF6 198 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF720Q7Z2F6 126 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 SETD3Q86TU7 594 aaPredicted RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 SLC7A5P1Q8MH63 180 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 KIF2BQ8N4N8 673 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 UBAC2Q8NBM4 344 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 C19orf18Q8NEA5 215 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 OR52P1PQ8NH57 321 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 ISOC2Q96AB3 205 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 L3HYPDHQ96EM0 354 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 OR10C1Q96KK4 312 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 RSG1Q9BU20 258 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 TMEM243Q9BU79 118 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 TM6SF2Q9BZW4 377 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 NAA50Q9GZZ1 169 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 C1orf198Q9H425 327 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 CYP3A43Q9HB55 503 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 EXOSC4Q9NPD3 245 aaKnown RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 COMMD3-BMI1R4GMX3 469 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 ANKRD36A6QL64 1941 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 MALRD1Q5VYJ5 2156 aa2.81□□□□□ -1.96
LIMA1-205ENST00000550592 HRNRQ86YZ3 2850 aaPredicted RBP2.81□□□□□ -1.96
LIMA1-205ENST00000550592 RYR2Q92736 4967 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 IGHV3-72A0A0B4J1Y9 119 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 CXorf51AA0A1B0GTR3 108 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 E7EQ34 232 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 KLRC4-KLRK1H3BQV0 150 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 LCA5LO95447 670 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 PRKACAP17612 351 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 TAS2R39P59534 338 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 OR2B8PP59922 312 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 ATP6V0D1P61421 351 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 YWHAEP62258 255 aaKnown RBP2.8□□□□□ -1.96
LIMA1-205ENST00000550592 UBE2IP63279 158 aaKnown RBP2.8□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF816Q0VGE8 651 aaPredicted RBP2.8□□□□□ -1.96
LIMA1-205ENST00000550592 TMEM249Q2WGJ8 235 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 FBXL19-AS1Q494R0 122 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 COX19Q49B96 90 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 TMEM256Q8N2U0 113 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 RPRMLQ8N4K4 120 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 OR6K2Q8NGY2 324 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 PIH1D2Q8WWB5 315 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms