RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ABCG5Q9H222 651 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 FAM118AQ9NWS6 357 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 TAS2R4Q9NYW5 299 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 ST3GAL6Q9Y274 331 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 GMPPBQ9Y5P6 360 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 IGHV3-72A0A0B4J1Y9 119 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 C15orf65H3BRN8 121 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 CCL24O00175 119 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 GPR12P47775 334 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 REG1BP48304 166 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 SOX2P48431 317 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 RAB40BQ12829 278 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 LINC00311Q8N616 119 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 Q96MT0 163 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 LIN7CQ9NUP9 197 aaKnown RBP17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 MRPS18AQ9NVS2 196 aaKnown RBP17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 IL36GQ9NZH8 169 aa17.05■□□□□ 0.32
SMARCC2-210ENST00000550519 NCBP2LA6PVI3 153 aaKnown RBP17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 H3BNX3 289 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 MPZL2O60487 215 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 CDRT1O95170 752 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 GTF2A1P52655 376 aaPredicted RBP17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 GP2P55259 537 aaKnown RBP17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 RBM11P57052 281 aaKnown RBP17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 PNLIPRP3Q17RR3 467 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 CBR4Q8N4T8 237 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 C8orf31Q8N9H6 132 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 Q8N9W7 124 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 TMEM104Q8NE00 496 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 OR52I1Q8NGK6 324 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 OR2T10Q8NGZ9 312 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 ST6GALNAC6Q969X2 333 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 DCLRE1BQ9H816 532 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 PLSCR3Q9NRY6 295 aa17.04■□□□□ 0.32
SMARCC2-210ENST00000550519 TMEM30CPA0ZSE6 113 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 DYNC1I1O14576 645 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 RAMP3O60896 148 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 OR7C1O76099 320 aaPredicted RBP17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 RPLP1P05386 114 aaKnown RBP17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 KLHL22Q53GT1 634 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 RNF152Q8N8N0 203 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 OR52N1Q8NH53 320 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 GPR148Q8TDV2 347 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 TFAP2CQ92754 450 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 ARL11Q969Q4 196 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 GON7Q9BXV9 100 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 METTL9Q9H1A3 318 aa17.03■□□□□ 0.32
SMARCC2-210ENST00000550519 GEMIN2O14893 280 aaKnown RBP17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 CD2P06729 351 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 LIMS3P0CW19 117 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 LIMS4P0CW20 117 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 CDX1P47902 265 aaPredicted RBP17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 KIR2DS1Q14954 304 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 LINC00596Q86U02 117 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 RTN4IP1Q8WWV3 396 aaPredicted RBP17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 TMEM106AQ96A25 262 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 TMEM138Q9NPI0 162 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 GFOD1Q9NXC2 390 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 ING4Q9UNL4 249 aa17.02■□□□□ 0.32
SMARCC2-210ENST00000550519 SDCBPO00560 298 aaPredicted RBP17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 ORC5O43913 435 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 NHLRC4P0CG21 123 aaPredicted RBP17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 CD1BP29016 333 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 FOXE3Q13461 319 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 GPR50Q13585 617 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 Q3ZCU0 254 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 CCDC58Q4VC31 144 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 CXorf66Q5JRM2 361 aaPredicted RBP17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 XAF1Q6GPH4 301 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 FAM53AQ6NSI3 398 aaPredicted RBP17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 RPL22L1Q6P5R6 122 aaKnown RBP17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 LCNL1Q6ZST4 164 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 OR8U1Q8NH10 309 aa17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 RPL36Q9Y3U8 105 aaKnown RBP17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 LSM4Q9Y4Z0 139 aaKnown RBP17.01■□□□□ 0.31
SMARCC2-210ENST00000550519 MOSP00540 346 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 CSTBP04080 98 aaKnown RBP17■□□□□ 0.31
SMARCC2-210ENST00000550519 ELANEP08246 267 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF93P35789 620 aaPredicted RBP17■□□□□ 0.31
SMARCC2-210ENST00000550519 LUMP51884 338 aaPredicted RBP17■□□□□ 0.31
SMARCC2-210ENST00000550519 RAB25P57735 213 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 MPV17LQ2QL34 196 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 DEFB136Q30KP8 78 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 DDI2Q5TDH0 399 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 ZFP1Q6P2D0 407 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 UBALD1Q8TB05 177 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 S1PR3Q99500 378 aa17■□□□□ 0.31
SMARCC2-210ENST00000550519 PAK1IP1Q9NWT1 392 aaPredicted RBP17■□□□□ 0.31
SMARCC2-210ENST00000550519 IGHV3-43A0A0B4J1X8 118 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF736B4DX44 427 aaPredicted RBP16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 MT-ND4P03905 459 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 IGHV3-43DP0DP04 118 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 SERPINA2P20848 420 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 IL3RAP26951 378 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 CFHR3Q02985 330 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 ATAD3CQ5T2N8 411 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF497Q6ZNH5 498 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 FAM71E2Q8N5Q1 922 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 OR8H1Q8NGG4 311 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 OR5M8Q8NGP6 311 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms